Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MTND6P24-201ENST00000440466 518 ntBASIC20.72■□□□□ 0.91
PDE6BP35913 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.72■□□□□ 0.91
PDE6BP35913 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.72■□□□□ 0.91
PDE6BP35913 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDE6BP35913 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PDE6BP35913 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PDE6BP35913 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.72■□□□□ 0.91
PDE6BP35913 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
PDE6BP35913 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDE6BP35913 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.72■□□□□ 0.91
PDE6BP35913 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.72■□□□□ 0.91
PDE6BP35913 AC004840.1-201ENST00000636359 365 ntBASIC20.72■□□□□ 0.91
PDE6BP35913 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE6BP35913 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE6BP35913 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE6BP35913 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.72■□□□□ 0.91
PDE6BP35913 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.72■□□□□ 0.91
PDE6BP35913 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PDE6BP35913 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.72■□□□□ 0.91
PDE6BP35913 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PDE6BP35913 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PDE6BP35913 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.72■□□□□ 0.91
PDE6BP35913 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PDE6BP35913 TNXA-203ENST00000507684 2038 ntBASIC20.71■□□□□ 0.91
PDE6BP35913 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE6BP35913 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE6BP35913 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDE6BP35913 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE6BP35913 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PDE6BP35913 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE6BP35913 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE6BP35913 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDE6BP35913 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.71■□□□□ 0.91
PDE6BP35913 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE6BP35913 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
PDE6BP35913 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDE6BP35913 AC026471.1-201ENST00000564629 3026 ntBASIC20.71■□□□□ 0.91
PDE6BP35913 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.71■□□□□ 0.91
PDE6BP35913 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE6BP35913 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE6BP35913 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
PDE6BP35913 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE6BP35913 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDE6BP35913 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PDE6BP35913 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.91
PDE6BP35913 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PDE6BP35913 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PDE6BP35913 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PDE6BP35913 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PDE6BP35913 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PDE6BP35913 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.7■□□□□ 0.9
PDE6BP35913 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.7■□□□□ 0.9
PDE6BP35913 AC022494.1-201ENST00000466044 728 ntBASIC20.7■□□□□ 0.9
PDE6BP35913 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.7■□□□□ 0.9
PDE6BP35913 HILS1-202ENST00000545329 423 ntBASIC20.7■□□□□ 0.9
PDE6BP35913 SPTSSB-204ENST00000617024 1292 ntBASIC20.7■□□□□ 0.9
PDE6BP35913 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
PDE6BP35913 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.7■□□□□ 0.9
PDE6BP35913 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.7■□□□□ 0.9
PDE6BP35913 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PDE6BP35913 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PDE6BP35913 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.7■□□□□ 0.9
PDE6BP35913 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.7■□□□□ 0.9
PDE6BP35913 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PDE6BP35913 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.7■□□□□ 0.9
PDE6BP35913 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6BP35913 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PDE6BP35913 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
PDE6BP35913 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.69■□□□□ 0.9
PDE6BP35913 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.69■□□□□ 0.9
PDE6BP35913 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.69■□□□□ 0.9
PDE6BP35913 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.69■□□□□ 0.9
PDE6BP35913 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms