Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN7P35236 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN7P35236 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN7P35236 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN7P35236 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.54■□□□□ 0.4
PTPN7P35236 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN7P35236 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PTPN7P35236 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN7P35236 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN7P35236 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PTPN7P35236 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN7P35236 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN7P35236 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN7P35236 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN7P35236 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
PTPN7P35236 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN7P35236 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
PTPN7P35236 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN7P35236 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN7P35236 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PTPN7P35236 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN7P35236 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PTPN7P35236 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PTPN7P35236 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN7P35236 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN7P35236 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN7P35236 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.53■□□□□ 0.4
PTPN7P35236 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN7P35236 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN7P35236 FGFR3P6-201ENST00000457012 610 ntBASIC17.53■□□□□ 0.4
PTPN7P35236 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN7P35236 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PTPN7P35236 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN7P35236 MTDHP3-201ENST00000594186 672 ntBASIC17.53■□□□□ 0.4
PTPN7P35236 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.53■□□□□ 0.4
PTPN7P35236 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
PTPN7P35236 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 ME2P1-201ENST00000426028 1970 ntBASIC17.53■□□□□ 0.4
PTPN7P35236 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN7P35236 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PTPN7P35236 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.53■□□□□ 0.4
PTPN7P35236 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN7P35236 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PTPN7P35236 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.52■□□□□ 0.4
PTPN7P35236 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN7P35236 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN7P35236 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.52■□□□□ 0.4
PTPN7P35236 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN7P35236 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN7P35236 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN7P35236 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN7P35236 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN7P35236 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN7P35236 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
PTPN7P35236 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN7P35236 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PTPN7P35236 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN7P35236 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN7P35236 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.52■□□□□ 0.4
PTPN7P35236 KRT18P31-201ENST00000506277 1292 ntBASIC17.52■□□□□ 0.4
PTPN7P35236 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN7P35236 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN7P35236 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.52■□□□□ 0.4
PTPN7P35236 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN7P35236 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.52■□□□□ 0.4
PTPN7P35236 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN7P35236 AC139887.3-201ENST00000568585 713 ntBASIC17.52■□□□□ 0.4
PTPN7P35236 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN7P35236 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PTPN7P35236 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN7P35236 AL121772.3-201ENST00000610840 674 ntBASIC17.52■□□□□ 0.4
PTPN7P35236 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN7P35236 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.52■□□□□ 0.4
PTPN7P35236 AC004706.3-202ENST00000621574 984 ntBASIC17.52■□□□□ 0.4
PTPN7P35236 AF228730.7-201ENST00000641842 219 ntBASIC17.52■□□□□ 0.4
PTPN7P35236 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN7P35236 SNX33P1-201ENST00000592116 1762 ntBASIC17.52■□□□□ 0.4
PTPN7P35236 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
PTPN7P35236 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN7P35236 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN7P35236 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN7P35236 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN7P35236 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.52■□□□□ 0.39
PTPN7P35236 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.52■□□□□ 0.39
PTPN7P35236 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.52■□□□□ 0.39
PTPN7P35236 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms