Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 SEC1P-202ENST00000473944 940 ntBASIC12.54□□□□□ -0.4
CKS2P33552 C1QBPP2-201ENST00000528754 825 ntBASIC12.54□□□□□ -0.4
CKS2P33552 BX088651.1-201ENST00000540551 451 ntBASIC12.54□□□□□ -0.4
CKS2P33552 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.54□□□□□ -0.4
CKS2P33552 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.54□□□□□ -0.4
CKS2P33552 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CKS2P33552 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.54□□□□□ -0.4
CKS2P33552 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC12.54□□□□□ -0.4
CKS2P33552 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CKS2P33552 AL023803.3-201ENST00000615559 522 ntBASIC12.54□□□□□ -0.4
CKS2P33552 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC12.54□□□□□ -0.4
CKS2P33552 AC092865.7-201ENST00000641832 219 ntBASIC12.54□□□□□ -0.4
CKS2P33552 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.54□□□□□ -0.4
CKS2P33552 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 HLA-A-202ENST00000376806 1854 ntBASIC12.54□□□□□ -0.4
CKS2P33552 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CKS2P33552 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.54□□□□□ -0.4
CKS2P33552 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.54□□□□□ -0.4
CKS2P33552 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CKS2P33552 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.54□□□□□ -0.4
CKS2P33552 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.54□□□□□ -0.4
CKS2P33552 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CKS2P33552 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CKS2P33552 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS2P33552 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS2P33552 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
CKS2P33552 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CKS2P33552 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS2P33552 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CKS2P33552 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS2P33552 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CKS2P33552 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS2P33552 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS2P33552 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS2P33552 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.53□□□□□ -0.4
CKS2P33552 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 ESRRAP1-201ENST00000400596 1257 ntBASIC12.53□□□□□ -0.4
CKS2P33552 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 PVRIG2P-201ENST00000435460 978 ntBASIC12.53□□□□□ -0.4
CKS2P33552 CCR12P-201ENST00000446203 998 ntBASIC12.53□□□□□ -0.4
CKS2P33552 NUDT16P1-203ENST00000513809 620 ntBASIC12.53□□□□□ -0.4
CKS2P33552 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.53□□□□□ -0.4
CKS2P33552 AC024243.1-201ENST00000609234 778 ntBASIC12.53□□□□□ -0.4
CKS2P33552 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CKS2P33552 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CKS2P33552 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CKS2P33552 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS2P33552 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS2P33552 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CKS2P33552 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS2P33552 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS2P33552 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CKS2P33552 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms