Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC8P31273 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC8P31273 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC8P31273 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.32■□□□□ 0.52
HOXC8P31273 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC8P31273 AL512638.1-201ENST00000457493 794 ntBASIC18.32■□□□□ 0.52
HOXC8P31273 SERBP1P5-201ENST00000510079 1181 ntBASIC18.32■□□□□ 0.52
HOXC8P31273 AC027369.6-201ENST00000525520 931 ntBASIC18.32■□□□□ 0.52
HOXC8P31273 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.32■□□□□ 0.52
HOXC8P31273 BANF1P1-201ENST00000553684 263 ntBASIC18.32■□□□□ 0.52
HOXC8P31273 AC005225.4-201ENST00000557330 545 ntBASIC18.32■□□□□ 0.52
HOXC8P31273 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXC8P31273 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC8P31273 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXC8P31273 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC8P31273 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC8P31273 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
HOXC8P31273 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXC8P31273 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXC8P31273 KRT8P39-201ENST00000396270 1433 ntBASIC18.32■□□□□ 0.52
HOXC8P31273 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HOXC8P31273 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC8P31273 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC8P31273 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC8P31273 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 AC067852.2-201ENST00000590513 2313 ntBASIC18.31■□□□□ 0.52
HOXC8P31273 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HOXC8P31273 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.31■□□□□ 0.52
HOXC8P31273 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.31■□□□□ 0.52
HOXC8P31273 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC8P31273 CRB3P1-201ENST00000449338 276 ntBASIC18.31■□□□□ 0.52
HOXC8P31273 AC009477.1-201ENST00000452936 217 ntBASIC18.31■□□□□ 0.52
HOXC8P31273 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 AC012645.4-201ENST00000610691 1061 ntBASIC18.31■□□□□ 0.52
HOXC8P31273 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HOXC8P31273 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
HOXC8P31273 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HOXC8P31273 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC8P31273 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC8P31273 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC8P31273 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC8P31273 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HOXC8P31273 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.31■□□□□ 0.52
HOXC8P31273 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC8P31273 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC8P31273 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
HOXC8P31273 AL035456.1-201ENST00000456064 1369 ntBASIC18.3■□□□□ 0.52
HOXC8P31273 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC8P31273 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC8P31273 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.3■□□□□ 0.52
HOXC8P31273 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HOXC8P31273 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC8P31273 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC8P31273 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC8P31273 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC8P31273 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.3■□□□□ 0.52
HOXC8P31273 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC8P31273 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.3■□□□□ 0.52
HOXC8P31273 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.3■□□□□ 0.52
HOXC8P31273 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.3■□□□□ 0.52
HOXC8P31273 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.3■□□□□ 0.52
HOXC8P31273 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC8P31273 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC8P31273 AC003101.2-201ENST00000612557 442 ntBASIC18.3■□□□□ 0.52
HOXC8P31273 SPTSSB-204ENST00000617024 1292 ntBASIC18.3■□□□□ 0.52
HOXC8P31273 AL139011.1-202ENST00000642063 584 ntBASIC18.3■□□□□ 0.52
HOXC8P31273 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC8P31273 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.3■□□□□ 0.52
HOXC8P31273 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC8P31273 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HOXC8P31273 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC8P31273 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC8P31273 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC8P31273 AC022144.1-201ENST00000602255 1580 ntBASIC18.3■□□□□ 0.52
HOXC8P31273 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms