Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1EP28566 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HTR1EP28566 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1EP28566 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1EP28566 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1EP28566 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1EP28566 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1EP28566 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.29■□□□□ 0.2
HTR1EP28566 CROCCP1-201ENST00000426910 5675 ntBASIC16.29■□□□□ 0.2
HTR1EP28566 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HTR1EP28566 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.29■□□□□ 0.2
HTR1EP28566 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.29■□□□□ 0.2
HTR1EP28566 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HTR1EP28566 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.29■□□□□ 0.2
HTR1EP28566 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 MIR1233-2-201ENST00000408138 82 ntBASIC16.29■□□□□ 0.2
HTR1EP28566 MIR1233-1-201ENST00000408722 82 ntBASIC16.29■□□□□ 0.2
HTR1EP28566 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
HTR1EP28566 NUS1P2-201ENST00000417358 873 ntBASIC16.29■□□□□ 0.2
HTR1EP28566 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.29■□□□□ 0.2
HTR1EP28566 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
HTR1EP28566 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.29■□□□□ 0.2
HTR1EP28566 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.29■□□□□ 0.2
HTR1EP28566 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.29■□□□□ 0.2
HTR1EP28566 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.29■□□□□ 0.2
HTR1EP28566 AF238378.1-201ENST00000526806 358 ntBASIC16.29■□□□□ 0.2
HTR1EP28566 KRT18P58-201ENST00000527480 1120 ntBASIC16.29■□□□□ 0.2
HTR1EP28566 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.29■□□□□ 0.2
HTR1EP28566 AC109462.3-201ENST00000573934 613 ntBASIC16.29■□□□□ 0.2
HTR1EP28566 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.29■□□□□ 0.2
HTR1EP28566 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.29■□□□□ 0.2
HTR1EP28566 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HTR1EP28566 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HTR1EP28566 AC008741.2-201ENST00000612792 3115 ntBASIC16.29■□□□□ 0.2
HTR1EP28566 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.29■□□□□ 0.2
HTR1EP28566 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.29■□□□□ 0.2
HTR1EP28566 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.29■□□□□ 0.2
HTR1EP28566 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1EP28566 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
HTR1EP28566 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.28■□□□□ 0.2
HTR1EP28566 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
HTR1EP28566 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.28■□□□□ 0.2
HTR1EP28566 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.28■□□□□ 0.2
HTR1EP28566 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.28■□□□□ 0.2
HTR1EP28566 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HTR1EP28566 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.28■□□□□ 0.2
HTR1EP28566 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.28■□□□□ 0.2
HTR1EP28566 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.28■□□□□ 0.2
HTR1EP28566 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.28■□□□□ 0.2
HTR1EP28566 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HTR1EP28566 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.28■□□□□ 0.2
HTR1EP28566 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.28■□□□□ 0.2
HTR1EP28566 AL592071.1-201ENST00000611956 408 ntBASIC16.28■□□□□ 0.2
HTR1EP28566 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms