Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.76■□□□□ 0.27
VARSP26640 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VARSP26640 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.76■□□□□ 0.27
VARSP26640 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.75■□□□□ 0.27
VARSP26640 AL135999.2-201ENST00000622438 1686 ntBASIC16.75■□□□□ 0.27
VARSP26640 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.75■□□□□ 0.27
VARSP26640 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VARSP26640 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
VARSP26640 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.75■□□□□ 0.27
VARSP26640 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 AGGF1P2-201ENST00000426656 2106 ntBASIC16.75■□□□□ 0.27
VARSP26640 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.75■□□□□ 0.27
VARSP26640 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.75■□□□□ 0.27
VARSP26640 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
VARSP26640 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
VARSP26640 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.75■□□□□ 0.27
VARSP26640 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.75■□□□□ 0.27
VARSP26640 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.75■□□□□ 0.27
VARSP26640 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.75■□□□□ 0.27
VARSP26640 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 AC139530.3-201ENST00000620344 690 ntBASIC16.75■□□□□ 0.27
VARSP26640 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VARSP26640 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.75■□□□□ 0.27
VARSP26640 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.75■□□□□ 0.27
VARSP26640 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VARSP26640 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
VARSP26640 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.75■□□□□ 0.27
VARSP26640 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARSP26640 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
VARSP26640 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.74■□□□□ 0.27
VARSP26640 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VARSP26640 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
VARSP26640 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.74■□□□□ 0.27
VARSP26640 AC093525.9-201ENST00000624961 1746 ntBASIC16.74■□□□□ 0.27
VARSP26640 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
VARSP26640 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VARSP26640 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VARSP26640 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.74■□□□□ 0.27
VARSP26640 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 AF186996.4-201ENST00000467186 377 ntBASIC16.74■□□□□ 0.27
VARSP26640 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.74■□□□□ 0.27
VARSP26640 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.74■□□□□ 0.27
VARSP26640 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.74■□□□□ 0.27
VARSP26640 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.74■□□□□ 0.27
VARSP26640 KRT18P58-201ENST00000527480 1120 ntBASIC16.74■□□□□ 0.27
VARSP26640 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC16.74■□□□□ 0.27
VARSP26640 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.74■□□□□ 0.27
VARSP26640 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.74■□□□□ 0.27
VARSP26640 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.74■□□□□ 0.27
VARSP26640 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.74■□□□□ 0.27
VARSP26640 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.74■□□□□ 0.27
VARSP26640 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
VARSP26640 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.74■□□□□ 0.27
VARSP26640 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.74■□□□□ 0.27
VARSP26640 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VARSP26640 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms