Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.39□□□□□ -0.11
VAMP1P23763 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.39□□□□□ -0.11
VAMP1P23763 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.39□□□□□ -0.11
VAMP1P23763 MIR3917-201ENST00000580971 93 ntBASIC14.39□□□□□ -0.11
VAMP1P23763 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VAMP1P23763 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VAMP1P23763 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.39□□□□□ -0.11
VAMP1P23763 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.39□□□□□ -0.11
VAMP1P23763 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.39□□□□□ -0.11
VAMP1P23763 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VAMP1P23763 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VAMP1P23763 AC092338.2-201ENST00000568827 1415 ntBASIC14.39□□□□□ -0.11
VAMP1P23763 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VAMP1P23763 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VAMP1P23763 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VAMP1P23763 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.39□□□□□ -0.11
VAMP1P23763 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VAMP1P23763 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.39□□□□□ -0.11
VAMP1P23763 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VAMP1P23763 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VAMP1P23763 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
VAMP1P23763 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VAMP1P23763 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.38□□□□□ -0.11
VAMP1P23763 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
VAMP1P23763 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
VAMP1P23763 AL365203.3-201ENST00000609742 2057 ntBASIC14.38□□□□□ -0.11
VAMP1P23763 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
VAMP1P23763 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.38□□□□□ -0.11
VAMP1P23763 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.38□□□□□ -0.11
VAMP1P23763 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VAMP1P23763 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VAMP1P23763 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
VAMP1P23763 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VAMP1P23763 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VAMP1P23763 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
VAMP1P23763 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VAMP1P23763 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.38□□□□□ -0.11
VAMP1P23763 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC14.38□□□□□ -0.11
VAMP1P23763 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.38□□□□□ -0.11
VAMP1P23763 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.38□□□□□ -0.11
VAMP1P23763 AC002558.1-201ENST00000488906 803 ntBASIC14.38□□□□□ -0.11
VAMP1P23763 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.38□□□□□ -0.11
VAMP1P23763 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.38□□□□□ -0.11
VAMP1P23763 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.38□□□□□ -0.11
VAMP1P23763 REXO1L10P-201ENST00000615707 1290 ntBASIC14.38□□□□□ -0.11
VAMP1P23763 REXO1L12P-201ENST00000622156 912 ntBASIC14.38□□□□□ -0.11
VAMP1P23763 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.38□□□□□ -0.11
VAMP1P23763 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
VAMP1P23763 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VAMP1P23763 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VAMP1P23763 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
VAMP1P23763 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VAMP1P23763 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VAMP1P23763 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VAMP1P23763 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VAMP1P23763 HLA-A-202ENST00000376806 1854 ntBASIC14.38□□□□□ -0.11
VAMP1P23763 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
VAMP1P23763 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
VAMP1P23763 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.37□□□□□ -0.11
VAMP1P23763 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
VAMP1P23763 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.37□□□□□ -0.11
VAMP1P23763 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
VAMP1P23763 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.37□□□□□ -0.11
VAMP1P23763 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
VAMP1P23763 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
VAMP1P23763 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.37□□□□□ -0.11
VAMP1P23763 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VAMP1P23763 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.37□□□□□ -0.11
VAMP1P23763 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.37□□□□□ -0.11
VAMP1P23763 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.37□□□□□ -0.11
VAMP1P23763 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.37□□□□□ -0.11
VAMP1P23763 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.37□□□□□ -0.11
VAMP1P23763 AC112698.1-201ENST00000510299 916 ntBASIC14.37□□□□□ -0.11
VAMP1P23763 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.37□□□□□ -0.11
VAMP1P23763 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.37□□□□□ -0.11
VAMP1P23763 AC116562.4-202ENST00000641738 218 ntBASIC14.37□□□□□ -0.11
VAMP1P23763 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.37□□□□□ -0.11
VAMP1P23763 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.37□□□□□ -0.11
VAMP1P23763 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VAMP1P23763 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms