Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B4P23634 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B4P23634 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B4P23634 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B4P23634 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B4P23634 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B4P23634 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B4P23634 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B4P23634 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B4P23634 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B4P23634 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B4P23634 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2B4P23634 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B4P23634 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B4P23634 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
ATP2B4P23634 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATP2B4P23634 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B4P23634 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2B4P23634 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
ATP2B4P23634 AC027369.6-201ENST00000525520 931 ntBASIC20.4■□□□□ 0.86
ATP2B4P23634 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.4■□□□□ 0.86
ATP2B4P23634 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.4■□□□□ 0.86
ATP2B4P23634 LINC02012-201ENST00000608206 1725 ntBASIC20.4■□□□□ 0.86
ATP2B4P23634 AC007967.4-201ENST00000614700 386 ntBASIC20.4■□□□□ 0.86
ATP2B4P23634 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2B4P23634 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B4P23634 AL590560.3-201ENST00000623350 461 ntBASIC20.4■□□□□ 0.86
ATP2B4P23634 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B4P23634 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B4P23634 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B4P23634 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2B4P23634 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2B4P23634 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2B4P23634 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2B4P23634 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2B4P23634 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2B4P23634 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.39■□□□□ 0.86
ATP2B4P23634 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.39■□□□□ 0.86
ATP2B4P23634 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B4P23634 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B4P23634 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.39■□□□□ 0.85
ATP2B4P23634 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP2B4P23634 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B4P23634 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.39■□□□□ 0.85
ATP2B4P23634 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B4P23634 PRYP6-201ENST00000514804 343 ntBASIC20.39■□□□□ 0.85
ATP2B4P23634 AL035252.4-201ENST00000624174 288 ntBASIC20.39■□□□□ 0.85
ATP2B4P23634 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B4P23634 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B4P23634 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B4P23634 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B4P23634 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ATP2B4P23634 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B4P23634 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B4P23634 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B4P23634 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B4P23634 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2B4P23634 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2B4P23634 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATP2B4P23634 FOXO1B-201ENST00000504678 1527 ntBASIC20.38■□□□□ 0.85
ATP2B4P23634 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2B4P23634 AC100757.3-201ENST00000622361 1406 ntBASIC20.38■□□□□ 0.85
ATP2B4P23634 TUBB8P12-201ENST00000308911 1335 ntBASIC20.38■□□□□ 0.85
ATP2B4P23634 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2B4P23634 TUBB7P-202ENST00000428444 1305 ntBASIC20.38■□□□□ 0.85
ATP2B4P23634 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2B4P23634 TUBB8P7-204ENST00000567960 1332 ntBASIC20.38■□□□□ 0.85
ATP2B4P23634 AC063926.2-201ENST00000623766 1308 ntBASIC20.38■□□□□ 0.85
ATP2B4P23634 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP2B4P23634 MRPS18AP1-201ENST00000414458 589 ntBASIC20.38■□□□□ 0.85
ATP2B4P23634 AC005034.1-201ENST00000426657 489 ntBASIC20.38■□□□□ 0.85
ATP2B4P23634 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP2B4P23634 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.38■□□□□ 0.85
ATP2B4P23634 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.38■□□□□ 0.85
ATP2B4P23634 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP2B4P23634 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.38■□□□□ 0.85
ATP2B4P23634 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP2B4P23634 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.38■□□□□ 0.85
ATP2B4P23634 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2B4P23634 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATP2B4P23634 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2B4P23634 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2B4P23634 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2B4P23634 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2B4P23634 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP2B4P23634 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ATP2B4P23634 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2B4P23634 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2B4P23634 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ATP2B4P23634 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2B4P23634 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ATP2B4P23634 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2B4P23634 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.37■□□□□ 0.85
ATP2B4P23634 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2B4P23634 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2B4P23634 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2B4P23634 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ATP2B4P23634 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2B4P23634 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2B4P23634 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms