Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NCLP19338 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.28■□□□□ 0.84
NCLP19338 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NCLP19338 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.28■□□□□ 0.84
NCLP19338 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NCLP19338 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
NCLP19338 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC20.28■□□□□ 0.84
NCLP19338 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.28■□□□□ 0.84
NCLP19338 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.28■□□□□ 0.84
NCLP19338 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.28■□□□□ 0.84
NCLP19338 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.28■□□□□ 0.84
NCLP19338 AC093458.2-201ENST00000623150 629 ntBASIC20.28■□□□□ 0.84
NCLP19338 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.28■□□□□ 0.84
NCLP19338 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NCLP19338 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NCLP19338 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.28■□□□□ 0.84
NCLP19338 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
NCLP19338 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 PCDHB17P-201ENST00000539533 2393 ntBASIC20.28■□□□□ 0.84
NCLP19338 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCLP19338 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NCLP19338 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.27■□□□□ 0.84
NCLP19338 AC046185.3-201ENST00000623228 1824 ntBASIC20.27■□□□□ 0.84
NCLP19338 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCLP19338 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCLP19338 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.27■□□□□ 0.84
NCLP19338 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.27■□□□□ 0.84
NCLP19338 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.27■□□□□ 0.84
NCLP19338 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NCLP19338 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCLP19338 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCLP19338 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NCLP19338 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCLP19338 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCLP19338 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.27■□□□□ 0.84
NCLP19338 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NCLP19338 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.27■□□□□ 0.84
NCLP19338 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.27■□□□□ 0.84
NCLP19338 AL645929.1-201ENST00000420084 975 ntBASIC20.27■□□□□ 0.84
NCLP19338 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.27■□□□□ 0.84
NCLP19338 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.27■□□□□ 0.84
NCLP19338 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.27■□□□□ 0.84
NCLP19338 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.27■□□□□ 0.84
NCLP19338 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.27■□□□□ 0.84
NCLP19338 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.27■□□□□ 0.84
NCLP19338 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.27■□□□□ 0.84
NCLP19338 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.27■□□□□ 0.84
NCLP19338 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCLP19338 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC20.27■□□□□ 0.84
NCLP19338 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NCLP19338 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NCLP19338 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NCLP19338 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NCLP19338 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
NCLP19338 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.27■□□□□ 0.83
NCLP19338 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NCLP19338 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NCLP19338 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
NCLP19338 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NCLP19338 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NCLP19338 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NCLP19338 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
NCLP19338 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NCLP19338 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
NCLP19338 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCLP19338 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCLP19338 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCLP19338 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCLP19338 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NCLP19338 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NCLP19338 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCLP19338 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCLP19338 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCLP19338 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.26■□□□□ 0.83
NCLP19338 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCLP19338 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCLP19338 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCLP19338 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCLP19338 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCLP19338 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NCLP19338 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.26■□□□□ 0.83
NCLP19338 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms