Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
XRCC1P18887 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.97■□□□□ 0.31
XRCC1P18887 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
XRCC1P18887 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.97■□□□□ 0.31
XRCC1P18887 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 MIR574-201ENST00000385209 96 ntBASIC16.97■□□□□ 0.31
XRCC1P18887 AC073621.1-201ENST00000392730 636 ntBASIC16.97■□□□□ 0.31
XRCC1P18887 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.97■□□□□ 0.31
XRCC1P18887 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.97■□□□□ 0.31
XRCC1P18887 AC098831.1-202ENST00000438821 336 ntBASIC16.97■□□□□ 0.31
XRCC1P18887 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.97■□□□□ 0.31
XRCC1P18887 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.97■□□□□ 0.31
XRCC1P18887 AC004706.3-202ENST00000621574 984 ntBASIC16.97■□□□□ 0.31
XRCC1P18887 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.97■□□□□ 0.31
XRCC1P18887 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.97■□□□□ 0.31
XRCC1P18887 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
XRCC1P18887 AP002414.3-201ENST00000589352 1468 ntBASIC16.97■□□□□ 0.31
XRCC1P18887 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
XRCC1P18887 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
XRCC1P18887 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
XRCC1P18887 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
XRCC1P18887 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
XRCC1P18887 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
XRCC1P18887 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
XRCC1P18887 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
XRCC1P18887 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
XRCC1P18887 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
XRCC1P18887 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.96■□□□□ 0.31
XRCC1P18887 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.96■□□□□ 0.31
XRCC1P18887 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
XRCC1P18887 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
XRCC1P18887 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
XRCC1P18887 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
XRCC1P18887 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
XRCC1P18887 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
XRCC1P18887 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.96■□□□□ 0.31
XRCC1P18887 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.96■□□□□ 0.31
XRCC1P18887 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.96■□□□□ 0.31
XRCC1P18887 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.96■□□□□ 0.31
XRCC1P18887 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.96■□□□□ 0.31
XRCC1P18887 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.96■□□□□ 0.31
XRCC1P18887 AL356488.2-201ENST00000602755 427 ntBASIC16.96■□□□□ 0.31
XRCC1P18887 ZNF259P1-201ENST00000407656 1365 ntBASIC16.96■□□□□ 0.31
XRCC1P18887 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
XRCC1P18887 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.96■□□□□ 0.31
XRCC1P18887 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
XRCC1P18887 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
XRCC1P18887 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.96■□□□□ 0.31
XRCC1P18887 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.96■□□□□ 0.31
XRCC1P18887 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.96■□□□□ 0.31
XRCC1P18887 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
XRCC1P18887 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
XRCC1P18887 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
XRCC1P18887 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
XRCC1P18887 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
XRCC1P18887 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
XRCC1P18887 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
XRCC1P18887 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.96■□□□□ 0.3
XRCC1P18887 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
XRCC1P18887 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.96■□□□□ 0.3
XRCC1P18887 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
XRCC1P18887 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
XRCC1P18887 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.96■□□□□ 0.3
XRCC1P18887 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
XRCC1P18887 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
XRCC1P18887 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
XRCC1P18887 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.95■□□□□ 0.3
XRCC1P18887 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
XRCC1P18887 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
XRCC1P18887 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
XRCC1P18887 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
XRCC1P18887 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.95■□□□□ 0.3
XRCC1P18887 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.95■□□□□ 0.3
XRCC1P18887 PMS2P1-201ENST00000431037 1228 ntBASIC16.95■□□□□ 0.3
XRCC1P18887 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.95■□□□□ 0.3
XRCC1P18887 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.95■□□□□ 0.3
XRCC1P18887 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.95■□□□□ 0.3
XRCC1P18887 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.95■□□□□ 0.3
XRCC1P18887 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.95■□□□□ 0.3
XRCC1P18887 AL671883.3-201ENST00000603274 991 ntBASIC16.95■□□□□ 0.3
XRCC1P18887 MIR1199-201ENST00000621445 119 ntBASIC16.95■□□□□ 0.3
XRCC1P18887 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
XRCC1P18887 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
XRCC1P18887 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
XRCC1P18887 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms