Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 AL662844.4-201ENST00000606367 2838 ntBASIC17.97■□□□□ 0.47
CHRNB2P17787 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CHRNB2P17787 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.97■□□□□ 0.47
CHRNB2P17787 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CHRNB2P17787 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.97■□□□□ 0.47
CHRNB2P17787 AC107918.2-201ENST00000530817 355 ntBASIC17.97■□□□□ 0.47
CHRNB2P17787 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.97■□□□□ 0.47
CHRNB2P17787 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CHRNB2P17787 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.97■□□□□ 0.47
CHRNB2P17787 PCDH8P1-201ENST00000428983 2773 ntBASIC17.97■□□□□ 0.47
CHRNB2P17787 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.97■□□□□ 0.47
CHRNB2P17787 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.97■□□□□ 0.47
CHRNB2P17787 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CHRNB2P17787 AC006449.5-201ENST00000610658 2098 ntBASIC17.97■□□□□ 0.47
CHRNB2P17787 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
CHRNB2P17787 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CHRNB2P17787 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB2P17787 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.96■□□□□ 0.47
CHRNB2P17787 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.96■□□□□ 0.47
CHRNB2P17787 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CHRNB2P17787 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CHRNB2P17787 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CHRNB2P17787 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.96■□□□□ 0.47
CHRNB2P17787 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.96■□□□□ 0.47
CHRNB2P17787 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.96■□□□□ 0.47
CHRNB2P17787 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.96■□□□□ 0.47
CHRNB2P17787 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.96■□□□□ 0.47
CHRNB2P17787 AC073648.2-201ENST00000510116 352 ntBASIC17.96■□□□□ 0.47
CHRNB2P17787 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.96■□□□□ 0.47
CHRNB2P17787 MPDU1-223ENST00000582151 728 ntBASIC17.96■□□□□ 0.47
CHRNB2P17787 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.96■□□□□ 0.47
CHRNB2P17787 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.96■□□□□ 0.47
CHRNB2P17787 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 SLC22A20-204ENST00000530038 1673 ntBASIC17.96■□□□□ 0.47
CHRNB2P17787 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNB2P17787 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CHRNB2P17787 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.96■□□□□ 0.46
CHRNB2P17787 AC079328.2-201ENST00000561241 3354 ntBASIC17.96■□□□□ 0.46
CHRNB2P17787 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CHRNB2P17787 AP002414.3-201ENST00000589352 1468 ntBASIC17.95■□□□□ 0.46
CHRNB2P17787 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.95■□□□□ 0.46
CHRNB2P17787 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHRNB2P17787 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNB2P17787 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNB2P17787 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNB2P17787 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNB2P17787 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNB2P17787 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CHRNB2P17787 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNB2P17787 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHRNB2P17787 PMS2P1-201ENST00000431037 1228 ntBASIC17.95■□□□□ 0.46
CHRNB2P17787 HLA-J-202ENST00000469281 1241 ntBASIC17.95■□□□□ 0.46
CHRNB2P17787 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNB2P17787 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNB2P17787 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.95■□□□□ 0.46
CHRNB2P17787 RN7SL510P-201ENST00000581311 263 ntBASIC17.95■□□□□ 0.46
CHRNB2P17787 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.95■□□□□ 0.46
CHRNB2P17787 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.95■□□□□ 0.46
CHRNB2P17787 AC008735.5-201ENST00000623544 497 ntBASIC17.95■□□□□ 0.46
CHRNB2P17787 AL139011.1-202ENST00000642063 584 ntBASIC17.95■□□□□ 0.46
CHRNB2P17787 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNB2P17787 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNB2P17787 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNB2P17787 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNB2P17787 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNB2P17787 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNB2P17787 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.95■□□□□ 0.46
CHRNB2P17787 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNB2P17787 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms