Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMPD1P17405 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.73■□□□□ 0.59
SMPD1P17405 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.73■□□□□ 0.59
SMPD1P17405 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SMPD1P17405 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMPD1P17405 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMPD1P17405 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SMPD1P17405 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMPD1P17405 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMPD1P17405 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMPD1P17405 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMPD1P17405 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.73■□□□□ 0.59
SMPD1P17405 TSSK5P-201ENST00000423978 907 ntBASIC18.73■□□□□ 0.59
SMPD1P17405 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.73■□□□□ 0.59
SMPD1P17405 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.73■□□□□ 0.59
SMPD1P17405 AC005225.4-201ENST00000557330 545 ntBASIC18.73■□□□□ 0.59
SMPD1P17405 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.73■□□□□ 0.59
SMPD1P17405 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.73■□□□□ 0.59
SMPD1P17405 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.73■□□□□ 0.59
SMPD1P17405 AC003101.2-201ENST00000612557 442 ntBASIC18.73■□□□□ 0.59
SMPD1P17405 AC073592.8-201ENST00000624126 511 ntBASIC18.73■□□□□ 0.59
SMPD1P17405 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMPD1P17405 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMPD1P17405 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SMPD1P17405 AC100757.3-201ENST00000622361 1406 ntBASIC18.73■□□□□ 0.59
SMPD1P17405 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMPD1P17405 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.73■□□□□ 0.59
SMPD1P17405 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.73■□□□□ 0.59
SMPD1P17405 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMPD1P17405 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMPD1P17405 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.73■□□□□ 0.59
SMPD1P17405 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.72■□□□□ 0.59
SMPD1P17405 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SMPD1P17405 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SMPD1P17405 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.72■□□□□ 0.59
SMPD1P17405 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.72■□□□□ 0.59
SMPD1P17405 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.72■□□□□ 0.59
SMPD1P17405 AC244107.1-201ENST00000442033 332 ntBASIC18.72■□□□□ 0.59
SMPD1P17405 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SMPD1P17405 SERBP1P5-201ENST00000510079 1181 ntBASIC18.72■□□□□ 0.59
SMPD1P17405 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.72■□□□□ 0.59
SMPD1P17405 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.72■□□□□ 0.59
SMPD1P17405 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.72■□□□□ 0.59
SMPD1P17405 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SMPD1P17405 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SMPD1P17405 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.72■□□□□ 0.59
SMPD1P17405 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.72■□□□□ 0.59
SMPD1P17405 AC063926.2-201ENST00000623766 1308 ntBASIC18.72■□□□□ 0.59
SMPD1P17405 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMPD1P17405 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMPD1P17405 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMPD1P17405 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMPD1P17405 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMPD1P17405 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMPD1P17405 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SMPD1P17405 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.71■□□□□ 0.59
SMPD1P17405 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.71■□□□□ 0.59
SMPD1P17405 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SMPD1P17405 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.71■□□□□ 0.59
SMPD1P17405 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SMPD1P17405 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.71■□□□□ 0.59
SMPD1P17405 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMPD1P17405 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMPD1P17405 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.71■□□□□ 0.59
SMPD1P17405 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMPD1P17405 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.71■□□□□ 0.59
SMPD1P17405 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMPD1P17405 SPDYE12P-201ENST00000618416 771 ntBASIC18.71■□□□□ 0.59
SMPD1P17405 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SMPD1P17405 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMPD1P17405 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMPD1P17405 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.71■□□□□ 0.59
SMPD1P17405 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.71■□□□□ 0.59
SMPD1P17405 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SMPD1P17405 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.71■□□□□ 0.59
SMPD1P17405 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMPD1P17405 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMPD1P17405 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMPD1P17405 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMPD1P17405 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.7■□□□□ 0.58
SMPD1P17405 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMPD1P17405 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms