Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
APOA4P06727 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 DOC2GP-204ENST00000639052 2548 ntBASIC17.05■□□□□ 0.32
APOA4P06727 AC018695.7-201ENST00000624587 2492 ntBASIC17.05■□□□□ 0.32
APOA4P06727 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
APOA4P06727 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.05■□□□□ 0.32
APOA4P06727 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.05■□□□□ 0.32
APOA4P06727 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.05■□□□□ 0.32
APOA4P06727 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.05■□□□□ 0.32
APOA4P06727 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
APOA4P06727 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.05■□□□□ 0.32
APOA4P06727 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
APOA4P06727 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.05■□□□□ 0.32
APOA4P06727 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.05■□□□□ 0.32
APOA4P06727 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.05■□□□□ 0.32
APOA4P06727 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
APOA4P06727 RNF216P1-203ENST00000404404 2427 ntBASIC17.05■□□□□ 0.32
APOA4P06727 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
APOA4P06727 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA4P06727 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.04■□□□□ 0.32
APOA4P06727 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA4P06727 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
APOA4P06727 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
APOA4P06727 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA4P06727 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
APOA4P06727 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA4P06727 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APOA4P06727 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
APOA4P06727 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA4P06727 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APOA4P06727 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APOA4P06727 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
APOA4P06727 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
APOA4P06727 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
APOA4P06727 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.04■□□□□ 0.32
APOA4P06727 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA4P06727 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
APOA4P06727 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.04■□□□□ 0.32
APOA4P06727 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.04■□□□□ 0.32
APOA4P06727 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.04■□□□□ 0.32
APOA4P06727 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.04■□□□□ 0.32
APOA4P06727 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
APOA4P06727 AL022326.1-202ENST00000641533 845 ntBASIC17.04■□□□□ 0.32
APOA4P06727 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.04■□□□□ 0.32
APOA4P06727 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
APOA4P06727 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
APOA4P06727 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA4P06727 GPR89P-201ENST00000407924 1495 ntBASIC17.04■□□□□ 0.32
APOA4P06727 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA4P06727 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.04■□□□□ 0.32
APOA4P06727 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA4P06727 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA4P06727 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
APOA4P06727 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.04■□□□□ 0.32
APOA4P06727 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA4P06727 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA4P06727 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.04■□□□□ 0.32
APOA4P06727 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
APOA4P06727 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
APOA4P06727 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOA4P06727 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.03■□□□□ 0.32
APOA4P06727 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
APOA4P06727 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOA4P06727 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
APOA4P06727 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.03■□□□□ 0.32
APOA4P06727 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOA4P06727 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.03■□□□□ 0.32
APOA4P06727 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.03■□□□□ 0.32
APOA4P06727 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
APOA4P06727 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOA4P06727 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.03■□□□□ 0.32
APOA4P06727 AKR1C7P-201ENST00000305623 895 ntBASIC17.03■□□□□ 0.32
APOA4P06727 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.03■□□□□ 0.32
APOA4P06727 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOA4P06727 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOA4P06727 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
APOA4P06727 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APOA4P06727 PRYP5-201ENST00000451909 266 ntBASIC17.03■□□□□ 0.32
APOA4P06727 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.03■□□□□ 0.32
APOA4P06727 FGFR3P6-201ENST00000457012 610 ntBASIC17.03■□□□□ 0.32
APOA4P06727 BX005266.1-201ENST00000473402 457 ntBASIC17.03■□□□□ 0.32
APOA4P06727 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
APOA4P06727 UNC93B7-201ENST00000509439 705 ntBASIC17.03■□□□□ 0.32
APOA4P06727 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms