Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
APOBP04114 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC10.4□□□□□ -0.74
APOBP04114 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
APOBP04114 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
APOBP04114 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOBP04114 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
APOBP04114 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC10.4□□□□□ -0.74
APOBP04114 RNA5SP412-201ENST00000516234 123 ntBASIC10.4□□□□□ -0.74
APOBP04114 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOBP04114 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 WFDC1-204ENST00000613603 549 ntBASIC10.4□□□□□ -0.74
APOBP04114 MIR8072-201ENST00000614241 80 ntBASIC10.4□□□□□ -0.74
APOBP04114 AL033527.5-201ENST00000641382 801 ntBASIC10.4□□□□□ -0.74
APOBP04114 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
APOBP04114 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC10.4□□□□□ -0.75
APOBP04114 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
APOBP04114 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
APOBP04114 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
APOBP04114 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
APOBP04114 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
APOBP04114 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
APOBP04114 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
APOBP04114 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC10.4□□□□□ -0.75
APOBP04114 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC10.4□□□□□ -0.75
APOBP04114 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC10.4□□□□□ -0.75
APOBP04114 AC091271.1-201ENST00000611877 1162 ntBASIC10.4□□□□□ -0.75
APOBP04114 PDIA3P1-201ENST00000471856 1510 ntBASIC10.39□□□□□ -0.75
APOBP04114 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.39□□□□□ -0.75
APOBP04114 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC10.39□□□□□ -0.75
APOBP04114 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
APOBP04114 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC10.39□□□□□ -0.75
APOBP04114 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC10.39□□□□□ -0.75
APOBP04114 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
APOBP04114 AC007389.4-201ENST00000454674 793 ntBASIC10.39□□□□□ -0.75
APOBP04114 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC10.39□□□□□ -0.75
APOBP04114 AC091167.2-201ENST00000579581 588 ntBASIC10.39□□□□□ -0.75
APOBP04114 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC10.39□□□□□ -0.75
APOBP04114 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC10.39□□□□□ -0.75
APOBP04114 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC10.39□□□□□ -0.75
APOBP04114 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
APOBP04114 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC10.39□□□□□ -0.75
APOBP04114 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC10.39□□□□□ -0.75
APOBP04114 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 SPDYE17-201ENST00000412399 783 ntBASIC10.39□□□□□ -0.75
APOBP04114 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC10.39□□□□□ -0.75
APOBP04114 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC10.39□□□□□ -0.75
APOBP04114 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
APOBP04114 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC10.39□□□□□ -0.75
APOBP04114 AC011495.1-201ENST00000498085 584 ntBASIC10.39□□□□□ -0.75
APOBP04114 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC10.39□□□□□ -0.75
APOBP04114 AC025048.3-201ENST00000590609 569 ntBASIC10.39□□□□□ -0.75
APOBP04114 AL391069.4-201ENST00000609583 481 ntBASIC10.39□□□□□ -0.75
APOBP04114 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC10.39□□□□□ -0.75
APOBP04114 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC10.39□□□□□ -0.75
APOBP04114 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC10.39□□□□□ -0.75
APOBP04114 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
APOBP04114 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC10.39□□□□□ -0.75
APOBP04114 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC10.39□□□□□ -0.75
APOBP04114 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC10.39□□□□□ -0.75
APOBP04114 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
APOBP04114 MIR4492-201ENST00000581627 80 ntBASIC10.39□□□□□ -0.75
APOBP04114 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
APOBP04114 AL671710.1-201ENST00000610245 2349 ntBASIC10.38□□□□□ -0.75
APOBP04114 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOBP04114 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC10.38□□□□□ -0.75
APOBP04114 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC10.38□□□□□ -0.75
APOBP04114 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC10.38□□□□□ -0.75
APOBP04114 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOBP04114 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOBP04114 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms