Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.67■□□□□ 0.58
CD4P01730 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.67■□□□□ 0.58
CD4P01730 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.67■□□□□ 0.58
CD4P01730 CR383656.12-201ENST00000549567 513 ntBASIC18.67■□□□□ 0.58
CD4P01730 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.67■□□□□ 0.58
CD4P01730 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CD4P01730 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD4P01730 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD4P01730 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD4P01730 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD4P01730 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.67■□□□□ 0.58
CD4P01730 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD4P01730 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD4P01730 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD4P01730 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD4P01730 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD4P01730 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CD4P01730 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD4P01730 AL353732.1-201ENST00000569618 1459 ntBASIC18.66■□□□□ 0.58
CD4P01730 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.66■□□□□ 0.58
CD4P01730 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.66■□□□□ 0.58
CD4P01730 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD4P01730 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.66■□□□□ 0.58
CD4P01730 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.66■□□□□ 0.58
CD4P01730 MEIS3P1-201ENST00000495167 958 ntBASIC18.66■□□□□ 0.58
CD4P01730 SERBP1P5-201ENST00000510079 1181 ntBASIC18.66■□□□□ 0.58
CD4P01730 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.66■□□□□ 0.58
CD4P01730 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.66■□□□□ 0.58
CD4P01730 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.66■□□□□ 0.58
CD4P01730 AC027307.2-201ENST00000591252 911 ntBASIC18.66■□□□□ 0.58
CD4P01730 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.66■□□□□ 0.58
CD4P01730 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CD4P01730 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CD4P01730 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CD4P01730 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.66■□□□□ 0.58
CD4P01730 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD4P01730 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD4P01730 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD4P01730 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD4P01730 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD4P01730 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD4P01730 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD4P01730 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.66■□□□□ 0.58
CD4P01730 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.66■□□□□ 0.58
CD4P01730 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD4P01730 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD4P01730 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD4P01730 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD4P01730 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.65■□□□□ 0.58
CD4P01730 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD4P01730 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD4P01730 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.65■□□□□ 0.58
CD4P01730 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD4P01730 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CD4P01730 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD4P01730 AC241585.1-201ENST00000433527 519 ntBASIC18.65■□□□□ 0.58
CD4P01730 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.65■□□□□ 0.58
CD4P01730 SPDYE22P-201ENST00000582158 798 ntBASIC18.65■□□□□ 0.58
CD4P01730 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.65■□□□□ 0.58
CD4P01730 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD4P01730 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD4P01730 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.65■□□□□ 0.58
CD4P01730 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD4P01730 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD4P01730 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.65■□□□□ 0.58
CD4P01730 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CD4P01730 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CD4P01730 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD4P01730 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.64■□□□□ 0.57
CD4P01730 AC007613.1-201ENST00000572811 2597 ntBASIC18.64■□□□□ 0.57
CD4P01730 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.64■□□□□ 0.57
CD4P01730 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD4P01730 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CD4P01730 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD4P01730 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CD4P01730 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD4P01730 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CD4P01730 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.64■□□□□ 0.57
CD4P01730 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.64■□□□□ 0.57
CD4P01730 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.64■□□□□ 0.57
CD4P01730 MIR4453-201ENST00000584019 89 ntBASIC18.64■□□□□ 0.57
CD4P01730 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.64■□□□□ 0.57
CD4P01730 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.64■□□□□ 0.57
CD4P01730 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD4P01730 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD4P01730 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD4P01730 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.64■□□□□ 0.57
CD4P01730 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD4P01730 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.64■□□□□ 0.57
CD4P01730 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CD4P01730 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CD4P01730 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD4P01730 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.64■□□□□ 0.57
CD4P01730 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CD4P01730 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD4P01730 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD4P01730 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CD4P01730 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD4P01730 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CD4P01730 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms