Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.09■□□□□ 0.17
CLPTM1O96005 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLPTM1O96005 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLPTM1O96005 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
CLPTM1O96005 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.09■□□□□ 0.17
CLPTM1O96005 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.09■□□□□ 0.17
CLPTM1O96005 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.09■□□□□ 0.17
CLPTM1O96005 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
CLPTM1O96005 AC141257.4-201ENST00000634557 245 ntBASIC16.09■□□□□ 0.17
CLPTM1O96005 AC136944.6-201ENST00000634818 245 ntBASIC16.09■□□□□ 0.17
CLPTM1O96005 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CLPTM1O96005 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLPTM1O96005 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CLPTM1O96005 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLPTM1O96005 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLPTM1O96005 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLPTM1O96005 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.09■□□□□ 0.17
CLPTM1O96005 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.09■□□□□ 0.17
CLPTM1O96005 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.09■□□□□ 0.17
CLPTM1O96005 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLPTM1O96005 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLPTM1O96005 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLPTM1O96005 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLPTM1O96005 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
CLPTM1O96005 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLPTM1O96005 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.08■□□□□ 0.17
CLPTM1O96005 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.08■□□□□ 0.17
CLPTM1O96005 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
CLPTM1O96005 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.08■□□□□ 0.17
CLPTM1O96005 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLPTM1O96005 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLPTM1O96005 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.08■□□□□ 0.17
CLPTM1O96005 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.08■□□□□ 0.17
CLPTM1O96005 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLPTM1O96005 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
CLPTM1O96005 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CLPTM1O96005 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.08■□□□□ 0.16
CLPTM1O96005 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 AC104076.2-201ENST00000448912 469 ntBASIC16.08■□□□□ 0.16
CLPTM1O96005 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.08■□□□□ 0.16
CLPTM1O96005 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.08■□□□□ 0.16
CLPTM1O96005 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.08■□□□□ 0.16
CLPTM1O96005 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.08■□□□□ 0.16
CLPTM1O96005 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.08■□□□□ 0.16
CLPTM1O96005 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 TCAF2P1-201ENST00000291129 2421 ntBASIC16.08■□□□□ 0.16
CLPTM1O96005 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.08■□□□□ 0.16
CLPTM1O96005 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 FAM45BP-202ENST00000592932 1624 ntBASIC16.08■□□□□ 0.16
CLPTM1O96005 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLPTM1O96005 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
CLPTM1O96005 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.07■□□□□ 0.16
CLPTM1O96005 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLPTM1O96005 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLPTM1O96005 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.07■□□□□ 0.16
CLPTM1O96005 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms