Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.2■□□□□ 0.02
CDRT1O95170 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDRT1O95170 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDRT1O95170 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.2■□□□□ 0.02
CDRT1O95170 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDRT1O95170 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDRT1O95170 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDRT1O95170 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDRT1O95170 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.2■□□□□ 0.02
CDRT1O95170 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.2■□□□□ 0.02
CDRT1O95170 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDRT1O95170 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDRT1O95170 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDRT1O95170 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDRT1O95170 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.19■□□□□ 0.02
CDRT1O95170 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CDRT1O95170 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.19■□□□□ 0.02
CDRT1O95170 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.19■□□□□ 0.02
CDRT1O95170 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.19■□□□□ 0.02
CDRT1O95170 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CDRT1O95170 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDRT1O95170 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.19■□□□□ 0.02
CDRT1O95170 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CDRT1O95170 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.19■□□□□ 0.02
CDRT1O95170 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.19■□□□□ 0.02
CDRT1O95170 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.19■□□□□ 0.02
CDRT1O95170 AC034232.1-201ENST00000506026 1064 ntBASIC15.19■□□□□ 0.02
CDRT1O95170 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 AC112698.1-201ENST00000510299 916 ntBASIC15.19■□□□□ 0.02
CDRT1O95170 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.19■□□□□ 0.02
CDRT1O95170 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.19■□□□□ 0.02
CDRT1O95170 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.19■□□□□ 0.02
CDRT1O95170 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CDRT1O95170 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.19■□□□□ 0.02
CDRT1O95170 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.19■□□□□ 0.02
CDRT1O95170 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT1O95170 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CDRT1O95170 AL391256.1-201ENST00000443260 1855 ntBASIC15.18■□□□□ 0.02
CDRT1O95170 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
CDRT1O95170 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CDRT1O95170 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDRT1O95170 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.18■□□□□ 0.02
CDRT1O95170 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.18■□□□□ 0.02
CDRT1O95170 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDRT1O95170 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CDRT1O95170 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.18■□□□□ 0.02
CDRT1O95170 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.18■□□□□ 0.02
CDRT1O95170 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.18■□□□□ 0.02
CDRT1O95170 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.18■□□□□ 0.02
CDRT1O95170 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.18■□□□□ 0.02
CDRT1O95170 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CDRT1O95170 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDRT1O95170 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.18■□□□□ 0.02
CDRT1O95170 AL023973.1-201ENST00000624619 620 ntBASIC15.18■□□□□ 0.02
CDRT1O95170 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.18■□□□□ 0.02
CDRT1O95170 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.18■□□□□ 0.02
CDRT1O95170 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.18■□□□□ 0.02
CDRT1O95170 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
CDRT1O95170 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.18■□□□□ 0.02
CDRT1O95170 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT1O95170 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDRT1O95170 KRT18P22-201ENST00000402024 1347 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms