Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNCGO76070 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNCGO76070 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SNCGO76070 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
SNCGO76070 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SNCGO76070 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
SNCGO76070 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SNCGO76070 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.46□□□□□ -0.58
SNCGO76070 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.46□□□□□ -0.58
SNCGO76070 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.46□□□□□ -0.58
SNCGO76070 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
SNCGO76070 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC11.46□□□□□ -0.58
SNCGO76070 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.46□□□□□ -0.58
SNCGO76070 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.46□□□□□ -0.58
SNCGO76070 AMT-233ENST00000636522 1620 ntTSL 2 BASIC11.46□□□□□ -0.58
SNCGO76070 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.46□□□□□ -0.58
SNCGO76070 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SNCGO76070 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
SNCGO76070 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC11.45□□□□□ -0.58
SNCGO76070 AL359183.1-201ENST00000623796 2132 ntBASIC11.45□□□□□ -0.58
SNCGO76070 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.45□□□□□ -0.58
SNCGO76070 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
SNCGO76070 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
SNCGO76070 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
SNCGO76070 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC11.45□□□□□ -0.58
SNCGO76070 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.45□□□□□ -0.58
SNCGO76070 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 MFF-205ENST00000354503 1085 ntTSL 2 BASIC11.45□□□□□ -0.58
SNCGO76070 ENSA-205ENST00000361532 792 ntTSL 2 BASIC11.45□□□□□ -0.58
SNCGO76070 HYI-206ENST00000372434 1025 ntTSL 5 BASIC11.45□□□□□ -0.58
SNCGO76070 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
SNCGO76070 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
SNCGO76070 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC11.45□□□□□ -0.58
SNCGO76070 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC11.45□□□□□ -0.58
SNCGO76070 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC11.45□□□□□ -0.58
SNCGO76070 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC11.45□□□□□ -0.58
SNCGO76070 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SNCGO76070 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC11.45□□□□□ -0.58
SNCGO76070 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
SNCGO76070 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC11.45□□□□□ -0.58
SNCGO76070 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC11.45□□□□□ -0.58
SNCGO76070 AC007686.3-201ENST00000619017 3487 ntBASIC11.45□□□□□ -0.58
SNCGO76070 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
SNCGO76070 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SNCGO76070 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.45□□□□□ -0.58
SNCGO76070 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.45□□□□□ -0.58
SNCGO76070 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.45□□□□□ -0.58
SNCGO76070 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNCGO76070 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.44□□□□□ -0.58
SNCGO76070 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC11.44□□□□□ -0.58
SNCGO76070 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC11.44□□□□□ -0.58
SNCGO76070 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC11.44□□□□□ -0.58
SNCGO76070 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC11.44□□□□□ -0.58
SNCGO76070 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms