Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.92■□□□□ 0.3
KLHL41O60662 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.92■□□□□ 0.3
KLHL41O60662 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.92■□□□□ 0.3
KLHL41O60662 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 PCDHB17P-201ENST00000539533 2393 ntBASIC16.92■□□□□ 0.3
KLHL41O60662 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
KLHL41O60662 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
KLHL41O60662 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
KLHL41O60662 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
KLHL41O60662 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL41O60662 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.91■□□□□ 0.3
KLHL41O60662 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
KLHL41O60662 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.91■□□□□ 0.3
KLHL41O60662 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL41O60662 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL41O60662 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL41O60662 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL41O60662 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL41O60662 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.91■□□□□ 0.3
KLHL41O60662 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
KLHL41O60662 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.91■□□□□ 0.3
KLHL41O60662 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL41O60662 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL41O60662 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
KLHL41O60662 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
KLHL41O60662 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL41O60662 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.91■□□□□ 0.3
KLHL41O60662 IGHV3-47-201ENST00000425060 335 ntBASIC16.91■□□□□ 0.3
KLHL41O60662 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.91■□□□□ 0.3
KLHL41O60662 AC106795.1-205ENST00000512851 1056 ntBASIC16.91■□□□□ 0.3
KLHL41O60662 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.91■□□□□ 0.3
KLHL41O60662 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL41O60662 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.91■□□□□ 0.3
KLHL41O60662 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.91■□□□□ 0.3
KLHL41O60662 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.91■□□□□ 0.3
KLHL41O60662 AL031008.1-201ENST00000619963 541 ntBASIC16.91■□□□□ 0.3
KLHL41O60662 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.91■□□□□ 0.3
KLHL41O60662 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.91■□□□□ 0.3
KLHL41O60662 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
KLHL41O60662 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL41O60662 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.91■□□□□ 0.3
KLHL41O60662 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL41O60662 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL41O60662 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.91■□□□□ 0.3
KLHL41O60662 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
KLHL41O60662 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
KLHL41O60662 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
KLHL41O60662 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
KLHL41O60662 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL41O60662 AC026691.1-201ENST00000602502 2017 ntBASIC16.91■□□□□ 0.3
KLHL41O60662 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.91■□□□□ 0.3
KLHL41O60662 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL41O60662 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
KLHL41O60662 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL41O60662 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL41O60662 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL41O60662 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.9■□□□□ 0.3
KLHL41O60662 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL41O60662 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL41O60662 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.9■□□□□ 0.3
KLHL41O60662 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.9■□□□□ 0.3
KLHL41O60662 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.9■□□□□ 0.3
KLHL41O60662 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL41O60662 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.9■□□□□ 0.3
KLHL41O60662 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.9■□□□□ 0.3
KLHL41O60662 SAPCD2P3-201ENST00000455031 850 ntBASIC16.9■□□□□ 0.3
KLHL41O60662 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.9■□□□□ 0.3
KLHL41O60662 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL41O60662 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.9■□□□□ 0.3
KLHL41O60662 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL41O60662 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
KLHL41O60662 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.9■□□□□ 0.3
KLHL41O60662 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL41O60662 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.9■□□□□ 0.3
KLHL41O60662 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL41O60662 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
KLHL41O60662 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.9■□□□□ 0.3
KLHL41O60662 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL41O60662 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.9■□□□□ 0.3
KLHL41O60662 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL41O60662 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
KLHL41O60662 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
KLHL41O60662 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
KLHL41O60662 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.89■□□□□ 0.29
KLHL41O60662 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
KLHL41O60662 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
KLHL41O60662 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
KLHL41O60662 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
KLHL41O60662 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms