Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.09■□□□□ 0.33
SMAD6O43541 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SMAD6O43541 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SMAD6O43541 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SMAD6O43541 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.08■□□□□ 0.33
SMAD6O43541 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMAD6O43541 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMAD6O43541 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SMAD6O43541 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.08■□□□□ 0.33
SMAD6O43541 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD6O43541 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD6O43541 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD6O43541 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SMAD6O43541 TUBB8P12-201ENST00000308911 1335 ntBASIC17.08■□□□□ 0.32
SMAD6O43541 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SMAD6O43541 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.08■□□□□ 0.32
SMAD6O43541 TUBB7P-202ENST00000428444 1305 ntBASIC17.08■□□□□ 0.32
SMAD6O43541 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD6O43541 TUBB8P7-204ENST00000567960 1332 ntBASIC17.08■□□□□ 0.32
SMAD6O43541 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.08■□□□□ 0.32
SMAD6O43541 HCG4-201ENST00000418983 998 ntBASIC17.08■□□□□ 0.32
SMAD6O43541 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.08■□□□□ 0.32
SMAD6O43541 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.08■□□□□ 0.32
SMAD6O43541 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.08■□□□□ 0.32
SMAD6O43541 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.08■□□□□ 0.32
SMAD6O43541 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.08■□□□□ 0.32
SMAD6O43541 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD6O43541 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.08■□□□□ 0.32
SMAD6O43541 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.08■□□□□ 0.32
SMAD6O43541 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.08■□□□□ 0.32
SMAD6O43541 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.08■□□□□ 0.32
SMAD6O43541 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SMAD6O43541 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD6O43541 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.08■□□□□ 0.32
SMAD6O43541 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.08■□□□□ 0.32
SMAD6O43541 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.08■□□□□ 0.32
SMAD6O43541 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SMAD6O43541 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD6O43541 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.08■□□□□ 0.32
SMAD6O43541 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD6O43541 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.08■□□□□ 0.32
SMAD6O43541 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
SMAD6O43541 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.08■□□□□ 0.32
SMAD6O43541 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD6O43541 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SMAD6O43541 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SMAD6O43541 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.07■□□□□ 0.32
SMAD6O43541 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.07■□□□□ 0.32
SMAD6O43541 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.07■□□□□ 0.32
SMAD6O43541 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.07■□□□□ 0.32
SMAD6O43541 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 DNAJB3-202ENST00000449667 1266 ntBASIC17.07■□□□□ 0.32
SMAD6O43541 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.07■□□□□ 0.32
SMAD6O43541 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
SMAD6O43541 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
SMAD6O43541 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.07■□□□□ 0.32
SMAD6O43541 AC087641.1-201ENST00000557561 1021 ntBASIC17.07■□□□□ 0.32
SMAD6O43541 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.07■□□□□ 0.32
SMAD6O43541 CYP2A7P1-201ENST00000595391 815 ntBASIC17.07■□□□□ 0.32
SMAD6O43541 AP001160.2-201ENST00000596071 487 ntBASIC17.07■□□□□ 0.32
SMAD6O43541 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.07■□□□□ 0.32
SMAD6O43541 AC099522.2-201ENST00000607001 744 ntBASIC17.07■□□□□ 0.32
SMAD6O43541 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.07■□□□□ 0.32
SMAD6O43541 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
SMAD6O43541 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.07■□□□□ 0.32
SMAD6O43541 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.07■□□□□ 0.32
SMAD6O43541 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SMAD6O43541 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 AC080080.1-201ENST00000625121 2420 ntBASIC17.07■□□□□ 0.32
SMAD6O43541 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SMAD6O43541 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SMAD6O43541 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms