Protein–RNA interactions for Protein: O43526

KCNQ2, Potassium voltage-gated channel subfamily KQT member 2, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2O43526 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.58■■□□□ 1.05
KCNQ2O43526 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.58■■□□□ 1.05
KCNQ2O43526 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KCNQ2O43526 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.58■■□□□ 1.05
KCNQ2O43526 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
KCNQ2O43526 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KCNQ2O43526 SNX29P1-201ENST00000548357 1007 ntBASIC21.58■■□□□ 1.05
KCNQ2O43526 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC21.58■■□□□ 1.05
KCNQ2O43526 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
KCNQ2O43526 AC133552.6-201ENST00000613406 534 ntBASIC21.58■■□□□ 1.05
KCNQ2O43526 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KCNQ2O43526 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC21.58■■□□□ 1.05
KCNQ2O43526 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KCNQ2O43526 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
KCNQ2O43526 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.58■■□□□ 1.04
KCNQ2O43526 AL355312.1-201ENST00000407115 2176 ntBASIC21.58■■□□□ 1.04
KCNQ2O43526 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KCNQ2O43526 SLC7A15P-201ENST00000424028 1363 ntBASIC21.58■■□□□ 1.04
KCNQ2O43526 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.58■■□□□ 1.04
KCNQ2O43526 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KCNQ2O43526 AC090164.3-201ENST00000610780 2143 ntBASIC21.58■■□□□ 1.04
KCNQ2O43526 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KCNQ2O43526 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
KCNQ2O43526 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.58■■□□□ 1.04
KCNQ2O43526 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KCNQ2O43526 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNQ2O43526 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC21.57■■□□□ 1.04
KCNQ2O43526 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
KCNQ2O43526 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNQ2O43526 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNQ2O43526 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
KCNQ2O43526 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
KCNQ2O43526 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNQ2O43526 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
KCNQ2O43526 AC073439.1-201ENST00000624121 1774 ntBASIC21.57■■□□□ 1.04
KCNQ2O43526 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
KCNQ2O43526 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC21.57■■□□□ 1.04
KCNQ2O43526 AC093004.1-201ENST00000508850 424 ntBASIC21.57■■□□□ 1.04
KCNQ2O43526 RAB35-202ENST00000534951 939 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNQ2O43526 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
KCNQ2O43526 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
KCNQ2O43526 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
KCNQ2O43526 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNQ2O43526 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNQ2O43526 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC21.57■■□□□ 1.04
KCNQ2O43526 CTBP2P3-201ENST00000585629 1255 ntBASIC21.57■■□□□ 1.04
KCNQ2O43526 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNQ2O43526 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
KCNQ2O43526 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNQ2O43526 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNQ2O43526 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNQ2O43526 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.57■■□□□ 1.04
KCNQ2O43526 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
KCNQ2O43526 GOLGA2P9-201ENST00000596977 1937 ntBASIC21.57■■□□□ 1.04
KCNQ2O43526 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ2O43526 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ2O43526 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ2O43526 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC21.56■■□□□ 1.04
KCNQ2O43526 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ2O43526 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ2O43526 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNQ2O43526 SLC25A1P3-201ENST00000395415 828 ntBASIC21.56■■□□□ 1.04
KCNQ2O43526 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ2O43526 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
KCNQ2O43526 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
KCNQ2O43526 TTTY23B-201ENST00000442790 549 ntBASIC21.56■■□□□ 1.04
KCNQ2O43526 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC21.56■■□□□ 1.04
KCNQ2O43526 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ2O43526 TPI1-206ENST00000488464 791 ntTSL 5 BASIC21.56■■□□□ 1.04
KCNQ2O43526 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNQ2O43526 USB1-203ENST00000539737 1212 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNQ2O43526 IGHV3OR16-16-201ENST00000563644 343 ntBASIC21.56■■□□□ 1.04
KCNQ2O43526 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
KCNQ2O43526 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.56■■□□□ 1.04
KCNQ2O43526 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
KCNQ2O43526 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ2O43526 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ2O43526 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
KCNQ2O43526 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNQ2O43526 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNQ2O43526 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNQ2O43526 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ2O43526 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
KCNQ2O43526 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNQ2O43526 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ2O43526 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC21.55■■□□□ 1.04
KCNQ2O43526 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ2O43526 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ2O43526 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ2O43526 MAX-210ENST00000555419 765 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNQ2O43526 MIR6775-201ENST00000617557 69 ntBASIC21.55■■□□□ 1.04
KCNQ2O43526 MIR6869-201ENST00000619434 62 ntBASIC21.55■■□□□ 1.04
KCNQ2O43526 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNQ2O43526 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ2O43526 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNQ2O43526 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ2O43526 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNQ2O43526 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ2O43526 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNQ2O43526 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms