Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNRC18O15417 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.08■□□□□ 0.48
TNRC18O15417 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
TNRC18O15417 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNRC18O15417 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
TNRC18O15417 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
TNRC18O15417 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 AC018735.1-201ENST00000437208 1502 ntBASIC18.07■□□□□ 0.48
TNRC18O15417 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.07■□□□□ 0.48
TNRC18O15417 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.07■□□□□ 0.48
TNRC18O15417 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 FGFR3P5-201ENST00000564496 886 ntBASIC18.07■□□□□ 0.48
TNRC18O15417 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.07■□□□□ 0.48
TNRC18O15417 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC18.07■□□□□ 0.48
TNRC18O15417 RN7SL736P-201ENST00000613111 269 ntBASIC18.07■□□□□ 0.48
TNRC18O15417 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.07■□□□□ 0.48
TNRC18O15417 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.07■□□□□ 0.48
TNRC18O15417 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.07■□□□□ 0.48
TNRC18O15417 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.07■□□□□ 0.48
TNRC18O15417 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 AC016694.1-201ENST00000434179 700 ntBASIC18.07■□□□□ 0.48
TNRC18O15417 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.07■□□□□ 0.48
TNRC18O15417 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.07■□□□□ 0.48
TNRC18O15417 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 LINC00895-201ENST00000629028 1637 ntBASIC18.07■□□□□ 0.48
TNRC18O15417 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.07■□□□□ 0.48
TNRC18O15417 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TNRC18O15417 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNRC18O15417 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TNRC18O15417 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TNRC18O15417 DUTP2-201ENST00000519164 463 ntBASIC18.06■□□□□ 0.48
TNRC18O15417 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TNRC18O15417 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNRC18O15417 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TNRC18O15417 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNRC18O15417 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TNRC18O15417 AC126915.1-201ENST00000522847 1038 ntBASIC18.06■□□□□ 0.48
TNRC18O15417 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.06■□□□□ 0.48
TNRC18O15417 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.06■□□□□ 0.48
TNRC18O15417 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNRC18O15417 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TNRC18O15417 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNRC18O15417 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.06■□□□□ 0.48
TNRC18O15417 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TNRC18O15417 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.06■□□□□ 0.48
TNRC18O15417 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.06■□□□□ 0.48
TNRC18O15417 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.06■□□□□ 0.48
TNRC18O15417 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.05■□□□□ 0.48
TNRC18O15417 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.05■□□□□ 0.48
TNRC18O15417 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.05■□□□□ 0.48
TNRC18O15417 AL133499.1-201ENST00000596207 608 ntBASIC18.05■□□□□ 0.48
TNRC18O15417 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC18.05■□□□□ 0.48
TNRC18O15417 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TNRC18O15417 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 PTP4A1P2-201ENST00000546033 454 ntBASIC18.05■□□□□ 0.48
TNRC18O15417 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNRC18O15417 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.05■□□□□ 0.48
TNRC18O15417 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TNRC18O15417 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TNRC18O15417 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TNRC18O15417 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNRC18O15417 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TNRC18O15417 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.04■□□□□ 0.48
TNRC18O15417 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TNRC18O15417 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNRC18O15417 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNRC18O15417 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.04■□□□□ 0.48
TNRC18O15417 PRKXP1-201ENST00000561423 1122 ntBASIC18.04■□□□□ 0.48
TNRC18O15417 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms