Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3EO15041 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3EO15041 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.32■□□□□ 0.84
SEMA3EO15041 FAM58DP-201ENST00000428076 619 ntBASIC20.32■□□□□ 0.84
SEMA3EO15041 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.32■□□□□ 0.84
SEMA3EO15041 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.32■□□□□ 0.84
SEMA3EO15041 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.32■□□□□ 0.84
SEMA3EO15041 IGHV3-62-201ENST00000520057 340 ntBASIC20.32■□□□□ 0.84
SEMA3EO15041 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3EO15041 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.32■□□□□ 0.84
SEMA3EO15041 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.32■□□□□ 0.84
SEMA3EO15041 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SEMA3EO15041 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.32■□□□□ 0.84
SEMA3EO15041 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3EO15041 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3EO15041 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SEMA3EO15041 AC016027.1-202ENST00000607927 1699 ntBASIC20.32■□□□□ 0.84
SEMA3EO15041 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.32■□□□□ 0.84
SEMA3EO15041 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3EO15041 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3EO15041 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3EO15041 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3EO15041 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SEMA3EO15041 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SEMA3EO15041 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SEMA3EO15041 AC006277.1-201ENST00000624348 1610 ntBASIC20.31■□□□□ 0.84
SEMA3EO15041 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3EO15041 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SEMA3EO15041 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3EO15041 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SEMA3EO15041 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3EO15041 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SEMA3EO15041 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3EO15041 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.31■□□□□ 0.84
SEMA3EO15041 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3EO15041 GPS2P2-201ENST00000430745 888 ntBASIC20.31■□□□□ 0.84
SEMA3EO15041 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.31■□□□□ 0.84
SEMA3EO15041 AP001059.3-201ENST00000619053 235 ntBASIC20.31■□□□□ 0.84
SEMA3EO15041 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.31■□□□□ 0.84
SEMA3EO15041 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3EO15041 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SEMA3EO15041 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3EO15041 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3EO15041 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3EO15041 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.3■□□□□ 0.84
SEMA3EO15041 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.3■□□□□ 0.84
SEMA3EO15041 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3EO15041 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3EO15041 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.3■□□□□ 0.84
SEMA3EO15041 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3EO15041 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.3■□□□□ 0.84
SEMA3EO15041 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3EO15041 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
SEMA3EO15041 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SEMA3EO15041 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.3■□□□□ 0.84
SEMA3EO15041 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.3■□□□□ 0.84
SEMA3EO15041 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.3■□□□□ 0.84
SEMA3EO15041 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.3■□□□□ 0.84
SEMA3EO15041 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.3■□□□□ 0.84
SEMA3EO15041 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.3■□□□□ 0.84
SEMA3EO15041 AC106028.4-201ENST00000614509 607 ntBASIC20.3■□□□□ 0.84
SEMA3EO15041 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3EO15041 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SEMA3EO15041 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.3■□□□□ 0.84
SEMA3EO15041 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.3■□□□□ 0.84
SEMA3EO15041 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3EO15041 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3EO15041 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3EO15041 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SEMA3EO15041 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3EO15041 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SEMA3EO15041 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SEMA3EO15041 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SEMA3EO15041 MIR346-201ENST00000362234 95 ntBASIC20.29■□□□□ 0.84
SEMA3EO15041 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.29■□□□□ 0.84
SEMA3EO15041 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.29■□□□□ 0.84
SEMA3EO15041 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.29■□□□□ 0.84
SEMA3EO15041 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.29■□□□□ 0.84
SEMA3EO15041 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.29■□□□□ 0.84
SEMA3EO15041 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.29■□□□□ 0.84
SEMA3EO15041 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.29■□□□□ 0.84
SEMA3EO15041 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.29■□□□□ 0.84
SEMA3EO15041 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
SEMA3EO15041 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.29■□□□□ 0.84
SEMA3EO15041 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms