Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
O00370 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.11■□□□□ 0.49
O00370 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.11■□□□□ 0.49
O00370 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.11■□□□□ 0.49
O00370 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.11■□□□□ 0.49
O00370 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.11■□□□□ 0.49
O00370 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.11■□□□□ 0.49
O00370 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.11■□□□□ 0.49
O00370 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.11■□□□□ 0.49
O00370 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.11■□□□□ 0.49
O00370 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
O00370 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
O00370 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.11■□□□□ 0.49
O00370 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
O00370 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
O00370 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.1■□□□□ 0.49
O00370 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.1■□□□□ 0.49
O00370 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
O00370 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.1■□□□□ 0.49
O00370 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
O00370 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.1■□□□□ 0.49
O00370 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
O00370 AC087163.2-201ENST00000457299 853 ntBASIC18.1■□□□□ 0.49
O00370 AC079776.4-201ENST00000511039 504 ntBASIC18.1■□□□□ 0.49
O00370 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
O00370 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.1■□□□□ 0.49
O00370 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.1■□□□□ 0.49
O00370 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.1■□□□□ 0.49
O00370 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.1■□□□□ 0.49
O00370 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.1■□□□□ 0.49
O00370 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
O00370 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.09■□□□□ 0.49
O00370 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.09■□□□□ 0.49
O00370 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.09■□□□□ 0.49
O00370 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 AC108073.2-201ENST00000464002 357 ntBASIC18.09■□□□□ 0.49
O00370 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.09■□□□□ 0.49
O00370 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.09■□□□□ 0.49
O00370 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
O00370 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
O00370 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
O00370 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
O00370 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.09■□□□□ 0.49
O00370 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.09■□□□□ 0.49
O00370 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
O00370 AC092171.3-201ENST00000610122 2651 ntBASIC18.08■□□□□ 0.49
O00370 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
O00370 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
O00370 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.08■□□□□ 0.49
O00370 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
O00370 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
O00370 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms