Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 HMGN1P19-201ENST00000436976 333 ntBASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC019129.2-201ENST00000609837 1235 ntBASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC105020.1-201ENST00000435356 2205 ntBASIC16.72■□□□□ 0.27
TMX2-CTNND1H3BSU7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC068418.2-201ENST00000577309 3703 ntBASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 ACTG1P14-201ENST00000446382 1122 ntBASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC002558.1-201ENST00000488906 803 ntBASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC096734.2-201ENST00000562054 433 ntBASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 AL513190.1-201ENST00000621254 727 ntBASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC007064.4-201ENST00000637740 555 ntBASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 PCDHA1-201ENST00000378133 2726 ntBASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMX2-CTNND1H3BSU7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TMX2-CTNND1H3BSU7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
TMX2-CTNND1H3BSU7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.71■□□□□ 0.26
TMX2-CTNND1H3BSU7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 AL023806.1-201ENST00000603994 1649 ntBASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 AC148477.5-201ENST00000625164 1645 ntBASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms