Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 YBX2P1-201ENST00000394192 760 ntBASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
YJEFN3A6XGL0 OR6D1P-202ENST00000641007 5290 ntBASIC17.64■□□□□ 0.42
YJEFN3A6XGL0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
YJEFN3A6XGL0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
YJEFN3A6XGL0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 AC012569.1-201ENST00000591191 1524 ntBASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 HMGA1P7-201ENST00000406908 502 ntBASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 BX842568.4-201ENST00000421222 227 ntBASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 MCCD1P2-201ENST00000423228 335 ntBASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 AC074386.1-202ENST00000463561 864 ntBASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 AL645728.2-201ENST00000641974 660 ntBASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 AC092919.2-201ENST00000623631 1645 ntBASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YJEFN3A6XGL0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 HCG4-201ENST00000418983 998 ntBASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 AL031432.2-201ENST00000566714 459 ntBASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 AL928711.1-201ENST00000570165 459 ntBASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 AC023511.2-201ENST00000618803 211 ntBASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YJEFN3A6XGL0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms