Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 AL139424.1-201ENST00000607572 797 ntBASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPDC1A2A3K4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPDC1A2A3K4 PCDHB17P-201ENST00000539533 2393 ntBASIC19.94■□□□□ 0.78
PTPDC1A2A3K4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PTPDC1A2A3K4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPDC1A2A3K4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPDC1A2A3K4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
PTPDC1A2A3K4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPDC1A2A3K4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPDC1A2A3K4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPDC1A2A3K4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
PTPDC1A2A3K4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPDC1A2A3K4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms