Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AL645728.1-201ENST00000366221 2101 ntBASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 MIR718-201ENST00000390190 70 ntBASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 AC141257.4-201ENST00000634557 245 ntBASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 AC136944.6-201ENST00000634818 245 ntBASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV18A0A075B6X5 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 GPR89P-201ENST00000407924 1495 ntBASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 HLA-F-220ENST00000434407 884 ntBASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 KRT17P2-201ENST00000300992 1314 ntBASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV18A0A075B6X5 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms