Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 KRT18P67-201ENST00000432816 1264 ntBASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 MTDHP3-201ENST00000594186 672 ntBASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 AC116407.2-201ENST00000613639 860 ntBASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 INTS4P1-201ENST00000438455 1935 ntBASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 AL391005.1-201ENST00000623953 2435 ntBASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX49Q9Y6V7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 AC018712.1-201ENST00000455767 687 ntBASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 RNPS1P1-201ENST00000507437 918 ntBASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 AL355877.3-201ENST00000622820 899 ntBASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DDX49Q9Y6V7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms