Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 AL589182.2-201ENST00000619332 1049 ntBASIC19.38■□□□□ 0.69
CLIC4Q9Y696 REXO1L6P-202ENST00000619970 1078 ntBASIC19.38■□□□□ 0.69
CLIC4Q9Y696 LINC00895-201ENST00000629028 1637 ntBASIC19.38■□□□□ 0.69
CLIC4Q9Y696 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIC4Q9Y696 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 PRELID1P1-202ENST00000567272 903 ntBASIC19.37■□□□□ 0.69
CLIC4Q9Y696 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLIC4Q9Y696 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 AF238378.1-201ENST00000526806 358 ntBASIC19.36■□□□□ 0.69
CLIC4Q9Y696 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.36■□□□□ 0.69
CLIC4Q9Y696 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 AC004706.3-202ENST00000621574 984 ntBASIC19.36■□□□□ 0.69
CLIC4Q9Y696 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 PKD1P1-201ENST00000458669 6805 ntBASIC19.36■□□□□ 0.69
CLIC4Q9Y696 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIC4Q9Y696 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms