Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MKNK2P1-201ENST00000437526 628 ntBASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 GPR89P-201ENST00000407924 1495 ntBASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 AL096828.2-201ENST00000567259 1965 ntBASIC16.58■□□□□ 0.25
PCDHGA3Q9Y5H0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA3Q9Y5H0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA3Q9Y5H0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDHGA3Q9Y5H0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA3Q9Y5H0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA3Q9Y5H0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA3Q9Y5H0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 AC254562.1-201ENST00000417586 456 ntBASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 IGHV3-52-201ENST00000519770 353 ntBASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 AC109462.3-201ENST00000573934 613 ntBASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 AC010654.1-201ENST00000615722 808 ntBASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 AC092865.6-201ENST00000642101 219 ntBASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 PKD1P5-201ENST00000532415 10291 ntBASIC16.58■□□□□ 0.24
PCDHGA3Q9Y5H0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 STK19B-204ENST00000512515 211 ntBASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 AC004790.2-201ENST00000623588 572 ntBASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms