Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL589182.2-201ENST00000619332 1049 ntBASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 FRMD8P1-201ENST00000440433 1524 ntBASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 KRT18P28-201ENST00000453838 1332 ntBASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 AC022211.2-201ENST00000585075 2527 ntBASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 AC073621.1-201ENST00000392730 636 ntBASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 AP006288.1-201ENST00000446065 395 ntBASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 AC006557.2-201ENST00000592985 1240 ntBASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 AL353135.1-201ENST00000606729 504 ntBASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB1Q9Y5F3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHB1Q9Y5F3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 ALG1L5P-201ENST00000482043 771 ntBASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms