Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 AC067852.2-201ENST00000590513 2313 ntBASIC17.65■□□□□ 0.42
YIPF1Q9Y548 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
YIPF1Q9Y548 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.64■□□□□ 0.42
YIPF1Q9Y548 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.64■□□□□ 0.42
YIPF1Q9Y548 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
YIPF1Q9Y548 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
YIPF1Q9Y548 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 BCRP1-201ENST00000444246 691 ntBASIC17.64■□□□□ 0.41
YIPF1Q9Y548 AC124947.2-201ENST00000547118 1133 ntBASIC17.64■□□□□ 0.41
YIPF1Q9Y548 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.64■□□□□ 0.41
YIPF1Q9Y548 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 SPDYE14P-201ENST00000442619 822 ntBASIC17.63■□□□□ 0.41
YIPF1Q9Y548 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 SLC25A39P2-201ENST00000537614 270 ntBASIC17.63■□□□□ 0.41
YIPF1Q9Y548 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 AC092364.2-202ENST00000597012 1073 ntBASIC17.63■□□□□ 0.41
YIPF1Q9Y548 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 AC008267.7-201ENST00000624570 1194 ntBASIC17.63■□□□□ 0.41
YIPF1Q9Y548 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 AC084121.4-201ENST00000641598 221 ntBASIC17.63■□□□□ 0.41
YIPF1Q9Y548 AF228730.8-201ENST00000642140 221 ntBASIC17.63■□□□□ 0.41
YIPF1Q9Y548 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.63■□□□□ 0.41
YIPF1Q9Y548 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
YIPF1Q9Y548 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF1Q9Y548 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.62■□□□□ 0.41
YIPF1Q9Y548 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.62■□□□□ 0.41
YIPF1Q9Y548 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF1Q9Y548 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
YIPF1Q9Y548 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
YIPF1Q9Y548 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.62■□□□□ 0.41
YIPF1Q9Y548 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
YIPF1Q9Y548 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.62■□□□□ 0.41
YIPF1Q9Y548 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF1Q9Y548 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF1Q9Y548 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF1Q9Y548 AC108860.2-201ENST00000562760 2183 ntBASIC17.62■□□□□ 0.41
YIPF1Q9Y548 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms