Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 KRT8P49-201ENST00000604166 1432 ntBASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 GIMAP3P-201ENST00000495150 836 ntBASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 HILS1-202ENST00000545329 423 ntBASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 MIR4492-201ENST00000581627 80 ntBASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 RN7SL828P-201ENST00000607615 303 ntBASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 RNA5-8SN1-201ENST00000610460 153 ntBASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 RNA5-8SN5-202ENST00000612463 153 ntBASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 RNA5-8SN4-201ENST00000613359 153 ntBASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 RNA5-8SN5-201ENST00000619471 153 ntBASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 AC004840.1-201ENST00000636359 365 ntBASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.21■□□□□ 0.99
RTCBQ9Y3I0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 AL021920.2-201ENST00000624828 1351 ntBASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTCBQ9Y3I0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 FAM220BP-201ENST00000377689 816 ntBASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTCBQ9Y3I0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms