Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 LYSMD4-203ENST00000378904 2122 ntBASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 AC108860.2-201ENST00000562760 2183 ntBASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 MRPL20P1-201ENST00000400819 433 ntBASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 DNAJB3-202ENST00000449667 1266 ntBASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 AL139327.4-201ENST00000612362 153 ntBASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPA1Q9UND3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
NPIPA1Q9UND3 GPR89P-201ENST00000407924 1495 ntBASIC15.71■□□□□ 0.1
NPIPA1Q9UND3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NPIPA1Q9UND3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPIPA1Q9UND3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
NPIPA1Q9UND3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPIPA1Q9UND3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NPIPA1Q9UND3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.71■□□□□ 0.1
NPIPA1Q9UND3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
NPIPA1Q9UND3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
NPIPA1Q9UND3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 AC020916.1-201ENST00000587762 1774 ntBASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 AL353135.1-201ENST00000606729 504 ntBASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 AL513190.1-201ENST00000621254 727 ntBASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NPIPA1Q9UND3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 PMS2P2-201ENST00000425039 1128 ntBASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 AC010654.1-201ENST00000615722 808 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms