Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 AL009183.1-201ENST00000603760 355 ntBASIC16.81■□□□□ 0.28
NCDNQ9UBB6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 AL133373.2-201ENST00000623187 2828 ntBASIC16.8■□□□□ 0.28
NCDNQ9UBB6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 INE1-201ENST00000456273 945 ntBASIC16.8■□□□□ 0.28
NCDNQ9UBB6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 AL162274.1-201ENST00000617191 1098 ntBASIC16.8■□□□□ 0.28
NCDNQ9UBB6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCDNQ9UBB6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 AP006294.1-201ENST00000415407 339 ntBASIC16.79■□□□□ 0.28
NCDNQ9UBB6 AL353779.1-201ENST00000434793 351 ntBASIC16.79■□□□□ 0.28
NCDNQ9UBB6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 RN7SL752P-201ENST00000463779 287 ntBASIC16.79■□□□□ 0.28
NCDNQ9UBB6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 AP000842.3-202ENST00000569238 1080 ntBASIC16.79■□□□□ 0.28
NCDNQ9UBB6 AC027307.2-201ENST00000591252 911 ntBASIC16.79■□□□□ 0.28
NCDNQ9UBB6 IGHV3-72-202ENST00000621503 303 ntBASIC16.79■□□□□ 0.28
NCDNQ9UBB6 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 AC008267.7-201ENST00000624570 1194 ntBASIC16.79■□□□□ 0.28
NCDNQ9UBB6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.79■□□□□ 0.28
NCDNQ9UBB6 WASH6P-202ENST00000359512 1437 ntBASIC16.79■□□□□ 0.28
NCDNQ9UBB6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.78■□□□□ 0.28
NCDNQ9UBB6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.78■□□□□ 0.28
NCDNQ9UBB6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCDNQ9UBB6 AC090340.1-201ENST00000620778 4980 ntBASIC16.78■□□□□ 0.28
NCDNQ9UBB6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NCDNQ9UBB6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms