Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 FAM58CP-201ENST00000435741 640 ntBASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 AC092183.1-201ENST00000469884 875 ntBASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 AC124947.2-201ENST00000547118 1133 ntBASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 AC068137.2-201ENST00000605408 478 ntBASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 AC091812.2-201ENST00000619081 385 ntBASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 ELL2P1-201ENST00000413990 1906 ntBASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.63■□□□□ 0.89
HMG20BQ9P0W2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 AP006288.1-201ENST00000446065 395 ntBASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 DNAJB3-202ENST00000449667 1266 ntBASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 AC092902.6-201ENST00000641783 218 ntBASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20BQ9P0W2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 AC022211.2-201ENST00000585075 2527 ntBASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 AC060834.1-201ENST00000443027 2032 ntBASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms