Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 IGHV3-42-201ENST00000520410 361 ntBASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 AC134043.2-201ENST00000624206 2238 ntBASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC10Q9NYD6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 GNAS-203ENST00000306120 1878 ntBASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 AC002472.2-201ENST00000442739 958 ntBASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 KRT18P34-201ENST00000488218 1270 ntBASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 RN7SL204P-201ENST00000582831 262 ntBASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 MIR4453-201ENST00000584019 89 ntBASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 AC239800.4-201ENST00000603712 296 ntBASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 LINC00896-202ENST00000609602 2128 ntBASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HOXC10Q9NYD6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 TERF1P3-201ENST00000505638 1227 ntBASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 AC105233.2-201ENST00000523697 349 ntBASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 AF228730.5-201ENST00000530288 346 ntBASIC19.3■□□□□ 0.68
HOXC10Q9NYD6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 206.5 ms