Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 EGFEM1P-202ENST00000431685 1563 ntBASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 AC073621.1-201ENST00000392730 636 ntBASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 AL805961.1-202ENST00000641562 540 ntBASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 AF228730.7-201ENST00000641842 219 ntBASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 AC006504.4-201ENST00000592118 1568 ntBASIC15.24■□□□□ 0.03
PARPBPQ9NWS1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 AC092910.1-201ENST00000482027 1129 ntBASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 RNA5SP419-201ENST00000515908 135 ntBASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 AC116407.3-201ENST00000623905 1129 ntBASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
PARPBPQ9NWS1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms