Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 AC096734.2-201ENST00000562054 433 ntBASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 FLJ16779-201ENST00000612722 7638 ntBASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ZNF304Q9HCX3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 AC002310.6-201ENST00000624451 1377 ntBASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 YBX2P1-201ENST00000394192 760 ntBASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 EGFEM1P-202ENST00000431685 1563 ntBASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 DNAJB3-201ENST00000446806 729 ntBASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 CXCL1P1-201ENST00000502804 216 ntBASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 GPALPP1-207ENST00000611650 899 ntBASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 AC010507.1-201ENST00000633895 436 ntBASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 AC129492.6-201ENST00000611383 1305 ntBASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ZNF304Q9HCX3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.14■□□□□ 0.18
ZNF304Q9HCX3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 AC124067.4-201ENST00000519691 2379 ntBASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 AC009053.2-201ENST00000563701 2365 ntBASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 SLC25A6P2-201ENST00000497974 877 ntBASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 MIR3687-2-201ENST00000577708 61 ntBASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 MTDHP5-201ENST00000598980 586 ntBASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 MIR3687-1-201ENST00000614492 61 ntBASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 AC007064.4-201ENST00000637740 555 ntBASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 AC007326.2-201ENST00000624224 7579 ntBASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 PRORSD1P-202ENST00000563365 2154 ntBASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms