Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 AP002982.1-201ENST00000492365 877 ntBASIC13.81□□□□□ -0.2
NKX6-2Q9C056 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 MIR5787-201ENST00000611784 55 ntBASIC13.81□□□□□ -0.2
NKX6-2Q9C056 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 AL031985.4-201ENST00000642138 673 ntBASIC13.81□□□□□ -0.2
NKX6-2Q9C056 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 HOXB1-202ENST00000577092 1414 ntBASIC13.81□□□□□ -0.2
NKX6-2Q9C056 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 GUSBP6-202ENST00000438529 1198 ntBASIC13.8□□□□□ -0.2
NKX6-2Q9C056 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 MIR3180-5-201ENST00000583743 153 ntBASIC13.8□□□□□ -0.2
NKX6-2Q9C056 AC130371.2-201ENST00000619443 611 ntBASIC13.8□□□□□ -0.2
NKX6-2Q9C056 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 AC133041.1-202ENST00000642053 222 ntBASIC13.8□□□□□ -0.2
NKX6-2Q9C056 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NKX6-2Q9C056 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 AC036111.1-201ENST00000533973 1582 ntBASIC13.79□□□□□ -0.2
NKX6-2Q9C056 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 AC007326.2-201ENST00000624224 7579 ntBASIC13.79□□□□□ -0.2
NKX6-2Q9C056 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 AL391807.1-203ENST00000604392 2365 ntBASIC13.79□□□□□ -0.2
NKX6-2Q9C056 AC007292.2-201ENST00000593524 1812 ntBASIC13.79□□□□□ -0.2
NKX6-2Q9C056 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms