Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6Q9C030 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6Q9C030 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6Q9C030 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6Q9C030 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6Q9C030 CROCCP1-201ENST00000426910 5675 ntBASIC18.68■□□□□ 0.58
TRIM6Q9C030 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6Q9C030 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM6Q9C030 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6Q9C030 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6Q9C030 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM6Q9C030 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM6Q9C030 MCCD1P2-201ENST00000423228 335 ntBASIC18.68■□□□□ 0.58
TRIM6Q9C030 PAWRP1-201ENST00000451083 565 ntBASIC18.68■□□□□ 0.58
TRIM6Q9C030 CXCL1P1-201ENST00000502804 216 ntBASIC18.68■□□□□ 0.58
TRIM6Q9C030 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6Q9C030 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM6Q9C030 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.68■□□□□ 0.58
TRIM6Q9C030 AL513190.1-201ENST00000621254 727 ntBASIC18.68■□□□□ 0.58
TRIM6Q9C030 AC007064.4-201ENST00000637740 555 ntBASIC18.68■□□□□ 0.58
TRIM6Q9C030 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6Q9C030 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM6Q9C030 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6Q9C030 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6Q9C030 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRIM6Q9C030 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6Q9C030 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6Q9C030 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM6Q9C030 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM6Q9C030 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM6Q9C030 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TRIM6Q9C030 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.67■□□□□ 0.58
TRIM6Q9C030 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM6Q9C030 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM6Q9C030 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM6Q9C030 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM6Q9C030 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRIM6Q9C030 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM6Q9C030 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM6Q9C030 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM6Q9C030 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM6Q9C030 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM6Q9C030 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRIM6Q9C030 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM6Q9C030 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM6Q9C030 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRIM6Q9C030 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRIM6Q9C030 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM6Q9C030 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.66■□□□□ 0.58
TRIM6Q9C030 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRIM6Q9C030 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRIM6Q9C030 AC087163.2-201ENST00000457299 853 ntBASIC18.66■□□□□ 0.58
TRIM6Q9C030 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.66■□□□□ 0.58
TRIM6Q9C030 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM6Q9C030 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM6Q9C030 AC023141.13-201ENST00000604991 943 ntBASIC18.66■□□□□ 0.58
TRIM6Q9C030 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM6Q9C030 AC055717.3-201ENST00000622967 595 ntBASIC18.66■□□□□ 0.58
TRIM6Q9C030 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM6Q9C030 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM6Q9C030 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM6Q9C030 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM6Q9C030 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRIM6Q9C030 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM6Q9C030 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRIM6Q9C030 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRIM6Q9C030 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM6Q9C030 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM6Q9C030 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM6Q9C030 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6Q9C030 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6Q9C030 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRIM6Q9C030 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6Q9C030 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6Q9C030 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6Q9C030 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM6Q9C030 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6Q9C030 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRIM6Q9C030 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM6Q9C030 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.65■□□□□ 0.58
TRIM6Q9C030 KRT19P2-202ENST00000557173 1012 ntBASIC18.65■□□□□ 0.58
TRIM6Q9C030 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.65■□□□□ 0.58
TRIM6Q9C030 PDPK2P-202ENST00000562415 1191 ntBASIC18.65■□□□□ 0.58
TRIM6Q9C030 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
TRIM6Q9C030 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms