Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 AL359258.3-201ENST00000622910 2331 ntBASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 AL359075.1-203ENST00000462729 1002 ntBASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 GRK6P1-201ENST00000400595 1711 ntBASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFAF3Q9BU61 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 AC036111.1-201ENST00000533973 1582 ntBASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 AL138688.1-201ENST00000624851 1594 ntBASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 AL365203.3-201ENST00000609742 2057 ntBASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 AL121956.5-201ENST00000625261 221 ntBASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 AL163051.1-201ENST00000569214 1512 ntBASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFAF3Q9BU61 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFAF3Q9BU61 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFAF3Q9BU61 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFAF3Q9BU61 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFAF3Q9BU61 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFAF3Q9BU61 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFAF3Q9BU61 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.21□□□□□ -0.3
NDUFAF3Q9BU61 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
NDUFAF3Q9BU61 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFAF3Q9BU61 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFAF3Q9BU61 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFAF3Q9BU61 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms