Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AL135999.2-201ENST00000622438 1686 ntBASIC12.94□□□□□ -0.34
VGLL1Q99990 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
VGLL1Q99990 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.94□□□□□ -0.34
VGLL1Q99990 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
VGLL1Q99990 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 FAM220CP-201ENST00000395253 831 ntBASIC12.94□□□□□ -0.34
VGLL1Q99990 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.94□□□□□ -0.34
VGLL1Q99990 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.94□□□□□ -0.34
VGLL1Q99990 RN7SL606P-201ENST00000472779 293 ntBASIC12.94□□□□□ -0.34
VGLL1Q99990 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.94□□□□□ -0.34
VGLL1Q99990 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.94□□□□□ -0.34
VGLL1Q99990 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
VGLL1Q99990 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.94□□□□□ -0.34
VGLL1Q99990 AL592071.1-201ENST00000611956 408 ntBASIC12.94□□□□□ -0.34
VGLL1Q99990 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
VGLL1Q99990 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.94□□□□□ -0.34
VGLL1Q99990 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
VGLL1Q99990 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.94□□□□□ -0.34
VGLL1Q99990 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.94□□□□□ -0.34
VGLL1Q99990 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
VGLL1Q99990 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
VGLL1Q99990 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.94□□□□□ -0.34
VGLL1Q99990 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.94□□□□□ -0.34
VGLL1Q99990 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.94□□□□□ -0.34
VGLL1Q99990 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.94□□□□□ -0.34
VGLL1Q99990 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
VGLL1Q99990 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
VGLL1Q99990 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.93□□□□□ -0.34
VGLL1Q99990 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.93□□□□□ -0.34
VGLL1Q99990 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VGLL1Q99990 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
VGLL1Q99990 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
VGLL1Q99990 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.93□□□□□ -0.34
VGLL1Q99990 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.93□□□□□ -0.34
VGLL1Q99990 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.93□□□□□ -0.34
VGLL1Q99990 AL645929.1-201ENST00000420084 975 ntBASIC12.93□□□□□ -0.34
VGLL1Q99990 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.93□□□□□ -0.34
VGLL1Q99990 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.93□□□□□ -0.34
VGLL1Q99990 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.93□□□□□ -0.34
VGLL1Q99990 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 AC011840.4-201ENST00000578471 627 ntBASIC12.93□□□□□ -0.34
VGLL1Q99990 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.93□□□□□ -0.34
VGLL1Q99990 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.93□□□□□ -0.34
VGLL1Q99990 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.93□□□□□ -0.34
VGLL1Q99990 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.93□□□□□ -0.34
VGLL1Q99990 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
VGLL1Q99990 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.93□□□□□ -0.34
VGLL1Q99990 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.93□□□□□ -0.34
VGLL1Q99990 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
VGLL1Q99990 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.93□□□□□ -0.34
VGLL1Q99990 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
VGLL1Q99990 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.93□□□□□ -0.34
VGLL1Q99990 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 FRMD8P1-201ENST00000440433 1524 ntBASIC12.93□□□□□ -0.34
VGLL1Q99990 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.93□□□□□ -0.34
VGLL1Q99990 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.93□□□□□ -0.34
VGLL1Q99990 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
VGLL1Q99990 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VGLL1Q99990 AL136379.1-201ENST00000623471 2642 ntBASIC12.92□□□□□ -0.34
VGLL1Q99990 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
VGLL1Q99990 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VGLL1Q99990 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.92□□□□□ -0.34
VGLL1Q99990 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
VGLL1Q99990 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.92□□□□□ -0.34
VGLL1Q99990 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.92□□□□□ -0.34
VGLL1Q99990 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.92□□□□□ -0.34
VGLL1Q99990 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.92□□□□□ -0.34
VGLL1Q99990 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms