Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.83□□□□□ -0.19
RAB40CQ96S21 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RAB40CQ96S21 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAB40CQ96S21 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
RAB40CQ96S21 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAB40CQ96S21 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAB40CQ96S21 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.83□□□□□ -0.19
RAB40CQ96S21 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAB40CQ96S21 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAB40CQ96S21 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
RAB40CQ96S21 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAB40CQ96S21 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAB40CQ96S21 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.83□□□□□ -0.19
RAB40CQ96S21 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAB40CQ96S21 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAB40CQ96S21 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RAB40CQ96S21 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40CQ96S21 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40CQ96S21 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40CQ96S21 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 ECEL1P3-201ENST00000427961 737 ntBASIC13.83□□□□□ -0.2
RAB40CQ96S21 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40CQ96S21 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40CQ96S21 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40CQ96S21 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 AC132872.4-202ENST00000622924 2756 ntBASIC13.83□□□□□ -0.2
RAB40CQ96S21 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40CQ96S21 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40CQ96S21 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40CQ96S21 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40CQ96S21 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40CQ96S21 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 AL353692.3-201ENST00000407031 1396 ntBASIC13.83□□□□□ -0.2
RAB40CQ96S21 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
RAB40CQ96S21 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 IGHGP-201ENST00000390555 1178 ntBASIC13.82□□□□□ -0.2
RAB40CQ96S21 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 RASA4DP-201ENST00000460726 1199 ntBASIC13.82□□□□□ -0.2
RAB40CQ96S21 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 AC145285.6-201ENST00000604632 637 ntBASIC13.82□□□□□ -0.2
RAB40CQ96S21 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 AC133561.5-201ENST00000635547 218 ntBASIC13.82□□□□□ -0.2
RAB40CQ96S21 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 AC067930.6-201ENST00000623257 4947 ntBASIC13.82□□□□□ -0.2
RAB40CQ96S21 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40CQ96S21 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms