Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC087163.2-201ENST00000457299 853 ntBASIC20.12■□□□□ 0.81
NEK1Q96PY6 AC136632.2-201ENST00000512891 861 ntBASIC20.12■□□□□ 0.81
NEK1Q96PY6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.12■□□□□ 0.81
NEK1Q96PY6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.12■□□□□ 0.81
NEK1Q96PY6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.12■□□□□ 0.81
NEK1Q96PY6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.12■□□□□ 0.81
NEK1Q96PY6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.12■□□□□ 0.81
NEK1Q96PY6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NEK1Q96PY6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NEK1Q96PY6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
NEK1Q96PY6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.12■□□□□ 0.81
NEK1Q96PY6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NEK1Q96PY6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
NEK1Q96PY6 PCDHA14-201ENST00000506751 2298 ntBASIC20.11■□□□□ 0.81
NEK1Q96PY6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NEK1Q96PY6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
NEK1Q96PY6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NEK1Q96PY6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.11■□□□□ 0.81
NEK1Q96PY6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.11■□□□□ 0.81
NEK1Q96PY6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NEK1Q96PY6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.11■□□□□ 0.81
NEK1Q96PY6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.11■□□□□ 0.81
NEK1Q96PY6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NEK1Q96PY6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NEK1Q96PY6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.11■□□□□ 0.81
NEK1Q96PY6 AP002469.2-201ENST00000531724 424 ntBASIC20.11■□□□□ 0.81
NEK1Q96PY6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
NEK1Q96PY6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.11■□□□□ 0.81
NEK1Q96PY6 AC105339.3-201ENST00000560043 636 ntBASIC20.11■□□□□ 0.81
NEK1Q96PY6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NEK1Q96PY6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NEK1Q96PY6 AC092171.3-201ENST00000610122 2651 ntBASIC20.11■□□□□ 0.81
NEK1Q96PY6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NEK1Q96PY6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.11■□□□□ 0.81
NEK1Q96PY6 AL391256.1-201ENST00000443260 1855 ntBASIC20.11■□□□□ 0.81
NEK1Q96PY6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NEK1Q96PY6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NEK1Q96PY6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NEK1Q96PY6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
NEK1Q96PY6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.1■□□□□ 0.81
NEK1Q96PY6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 AC002310.6-201ENST00000624451 1377 ntBASIC20.1■□□□□ 0.81
NEK1Q96PY6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.1■□□□□ 0.81
NEK1Q96PY6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.1■□□□□ 0.81
NEK1Q96PY6 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.1■□□□□ 0.81
NEK1Q96PY6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
NEK1Q96PY6 AL160237.2-201ENST00000556165 472 ntBASIC20.1■□□□□ 0.81
NEK1Q96PY6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.1■□□□□ 0.81
NEK1Q96PY6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.1■□□□□ 0.81
NEK1Q96PY6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.1■□□□□ 0.81
NEK1Q96PY6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
NEK1Q96PY6 AP002414.3-201ENST00000589352 1468 ntBASIC20.1■□□□□ 0.81
NEK1Q96PY6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NEK1Q96PY6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK1Q96PY6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.1■□□□□ 0.81
NEK1Q96PY6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.1■□□□□ 0.81
NEK1Q96PY6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK1Q96PY6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NEK1Q96PY6 TOP3BP1-201ENST00000420768 1380 ntBASIC20.09■□□□□ 0.81
NEK1Q96PY6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK1Q96PY6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK1Q96PY6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NEK1Q96PY6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.09■□□□□ 0.81
NEK1Q96PY6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK1Q96PY6 RPS2P28-201ENST00000314255 741 ntBASIC20.09■□□□□ 0.81
NEK1Q96PY6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK1Q96PY6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.09■□□□□ 0.81
NEK1Q96PY6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.09■□□□□ 0.81
NEK1Q96PY6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.09■□□□□ 0.81
NEK1Q96PY6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.09■□□□□ 0.81
NEK1Q96PY6 FDX1P1-201ENST00000449115 551 ntBASIC20.09■□□□□ 0.81
NEK1Q96PY6 SLC25A6P2-201ENST00000497974 877 ntBASIC20.09■□□□□ 0.81
NEK1Q96PY6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.09■□□□□ 0.81
NEK1Q96PY6 AL356488.2-201ENST00000602755 427 ntBASIC20.09■□□□□ 0.81
NEK1Q96PY6 FAM215A-202ENST00000632077 792 ntBASIC20.09■□□□□ 0.81
NEK1Q96PY6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.09■□□□□ 0.81
NEK1Q96PY6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
NEK1Q96PY6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NEK1Q96PY6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK1Q96PY6 AL603756.1-201ENST00000606511 2163 ntBASIC20.09■□□□□ 0.81
NEK1Q96PY6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.09■□□□□ 0.81
NEK1Q96PY6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK1Q96PY6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NEK1Q96PY6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.09■□□□□ 0.81
NEK1Q96PY6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms