Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 CRYGEP-201ENST00000412192 528 ntBASIC14.12□□□□□ -0.15
GAFA1Q96PS6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 VN2R19P-201ENST00000442399 1052 ntBASIC14.12□□□□□ -0.15
GAFA1Q96PS6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GAFA1Q96PS6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 AP002490.2-201ENST00000524791 560 ntBASIC14.11□□□□□ -0.15
GAFA1Q96PS6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 PRORSD1P-202ENST00000563365 2154 ntBASIC14.11□□□□□ -0.15
GAFA1Q96PS6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 PCDHA12-202ENST00000613593 2588 ntBASIC14.11□□□□□ -0.15
GAFA1Q96PS6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GAFA1Q96PS6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 IGLL3P-201ENST00000412472 434 ntBASIC14.1□□□□□ -0.15
GAFA1Q96PS6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 HCG4B-203ENST00000450128 991 ntBASIC14.1□□□□□ -0.15
GAFA1Q96PS6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 AC091167.2-201ENST00000579581 588 ntBASIC14.1□□□□□ -0.15
GAFA1Q96PS6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms