Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD4Q96M96 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD4Q96M96 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.16■□□□□ 0.66
FGD4Q96M96 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD4Q96M96 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
FGD4Q96M96 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
FGD4Q96M96 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.16■□□□□ 0.66
FGD4Q96M96 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
FGD4Q96M96 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
FGD4Q96M96 AC008677.1-201ENST00000519230 1561 ntBASIC19.15■□□□□ 0.66
FGD4Q96M96 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.15■□□□□ 0.66
FGD4Q96M96 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.15■□□□□ 0.66
FGD4Q96M96 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
FGD4Q96M96 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
FGD4Q96M96 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD4Q96M96 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.15■□□□□ 0.66
FGD4Q96M96 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
FGD4Q96M96 AC055876.3-201ENST00000431496 288 ntBASIC19.15■□□□□ 0.66
FGD4Q96M96 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.15■□□□□ 0.66
FGD4Q96M96 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.15■□□□□ 0.66
FGD4Q96M96 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.15■□□□□ 0.66
FGD4Q96M96 KRT8P23-201ENST00000560090 1207 ntBASIC19.15■□□□□ 0.66
FGD4Q96M96 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
FGD4Q96M96 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FGD4Q96M96 MIR4745-201ENST00000577608 62 ntBASIC19.15■□□□□ 0.66
FGD4Q96M96 AC091167.2-201ENST00000579581 588 ntBASIC19.15■□□□□ 0.66
FGD4Q96M96 AL031055.1-201ENST00000606362 631 ntBASIC19.15■□□□□ 0.66
FGD4Q96M96 AC138649.4-201ENST00000612222 287 ntBASIC19.15■□□□□ 0.66
FGD4Q96M96 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.15■□□□□ 0.66
FGD4Q96M96 TUBB3P1-201ENST00000405796 1332 ntBASIC19.15■□□□□ 0.66
FGD4Q96M96 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
FGD4Q96M96 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD4Q96M96 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FGD4Q96M96 WASH6P-202ENST00000359512 1437 ntBASIC19.15■□□□□ 0.66
FGD4Q96M96 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD4Q96M96 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD4Q96M96 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD4Q96M96 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.15■□□□□ 0.66
FGD4Q96M96 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FGD4Q96M96 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD4Q96M96 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FGD4Q96M96 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
FGD4Q96M96 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
FGD4Q96M96 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
FGD4Q96M96 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
FGD4Q96M96 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FGD4Q96M96 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD4Q96M96 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
FGD4Q96M96 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
FGD4Q96M96 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.14■□□□□ 0.66
FGD4Q96M96 AC116353.5-201ENST00000638148 1699 ntBASIC19.14■□□□□ 0.66
FGD4Q96M96 AC093525.9-201ENST00000624961 1746 ntBASIC19.14■□□□□ 0.66
FGD4Q96M96 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
FGD4Q96M96 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
FGD4Q96M96 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FGD4Q96M96 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FGD4Q96M96 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FGD4Q96M96 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
FGD4Q96M96 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FGD4Q96M96 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.14■□□□□ 0.65
FGD4Q96M96 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FGD4Q96M96 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.14■□□□□ 0.65
FGD4Q96M96 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FGD4Q96M96 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FGD4Q96M96 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.14■□□□□ 0.65
FGD4Q96M96 COX20P2-201ENST00000452636 358 ntBASIC19.14■□□□□ 0.65
FGD4Q96M96 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.14■□□□□ 0.65
FGD4Q96M96 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FGD4Q96M96 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.14■□□□□ 0.65
FGD4Q96M96 AC093214.1-201ENST00000511688 1107 ntBASIC19.14■□□□□ 0.65
FGD4Q96M96 SLC25A39P2-201ENST00000537614 270 ntBASIC19.14■□□□□ 0.65
FGD4Q96M96 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.14■□□□□ 0.65
FGD4Q96M96 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.14■□□□□ 0.65
FGD4Q96M96 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.14■□□□□ 0.65
FGD4Q96M96 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FGD4Q96M96 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FGD4Q96M96 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.14■□□□□ 0.65
FGD4Q96M96 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.14■□□□□ 0.65
FGD4Q96M96 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
FGD4Q96M96 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.14■□□□□ 0.65
FGD4Q96M96 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FGD4Q96M96 AL390961.4-201ENST00000623958 2535 ntBASIC19.14■□□□□ 0.65
FGD4Q96M96 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
FGD4Q96M96 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.65
FGD4Q96M96 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FGD4Q96M96 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FGD4Q96M96 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FGD4Q96M96 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.13■□□□□ 0.65
FGD4Q96M96 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
FGD4Q96M96 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.13■□□□□ 0.65
FGD4Q96M96 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FGD4Q96M96 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FGD4Q96M96 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FGD4Q96M96 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FGD4Q96M96 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.13■□□□□ 0.65
FGD4Q96M96 KLF2P3-201ENST00000451977 1087 ntBASIC19.13■□□□□ 0.65
FGD4Q96M96 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.13■□□□□ 0.65
FGD4Q96M96 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.13■□□□□ 0.65
FGD4Q96M96 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.13■□□□□ 0.65
FGD4Q96M96 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms