Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 AC092364.2-201ENST00000596710 2692 ntBASIC17.55■□□□□ 0.4
C9orf72Q96LT7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 PCDHA1-201ENST00000378133 2726 ntBASIC17.55■□□□□ 0.4
C9orf72Q96LT7 AC125634.1-201ENST00000438758 1403 ntBASIC17.55■□□□□ 0.4
C9orf72Q96LT7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 TSPY19P-201ENST00000418461 509 ntBASIC17.54■□□□□ 0.4
C9orf72Q96LT7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 TSPY18P-201ENST00000441642 509 ntBASIC17.54■□□□□ 0.4
C9orf72Q96LT7 AC074051.2-201ENST00000565115 352 ntBASIC17.54■□□□□ 0.4
C9orf72Q96LT7 RN7SL510P-201ENST00000581311 263 ntBASIC17.54■□□□□ 0.4
C9orf72Q96LT7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 AL121772.3-201ENST00000610840 674 ntBASIC17.54■□□□□ 0.4
C9orf72Q96LT7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf72Q96LT7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 AL135999.2-201ENST00000622438 1686 ntBASIC17.53■□□□□ 0.4
C9orf72Q96LT7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 UNC93B7-201ENST00000509439 705 ntBASIC17.53■□□□□ 0.4
C9orf72Q96LT7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.53■□□□□ 0.4
C9orf72Q96LT7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
C9orf72Q96LT7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 FRMD8P1-201ENST00000440433 1524 ntBASIC17.52■□□□□ 0.4
C9orf72Q96LT7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms