Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 AC010654.1-201ENST00000615722 808 ntBASIC17.94■□□□□ 0.46
ATP2A3Q93084 AC004790.2-201ENST00000623588 572 ntBASIC17.94■□□□□ 0.46
ATP2A3Q93084 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 AP002414.1-201ENST00000391405 1147 ntBASIC17.93■□□□□ 0.46
ATP2A3Q93084 MRPL20P1-201ENST00000400819 433 ntBASIC17.93■□□□□ 0.46
ATP2A3Q93084 HCG4B-203ENST00000450128 991 ntBASIC17.93■□□□□ 0.46
ATP2A3Q93084 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A3Q93084 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP2A3Q93084 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ATP2A3Q93084 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A3Q93084 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A3Q93084 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
ATP2A3Q93084 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A3Q93084 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A3Q93084 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A3Q93084 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A3Q93084 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A3Q93084 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A3Q93084 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.92■□□□□ 0.46
ATP2A3Q93084 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A3Q93084 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.46
ATP2A3Q93084 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ATP2A3Q93084 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A3Q93084 LINC00982-205ENST00000420957 435 ntBASIC17.92■□□□□ 0.46
ATP2A3Q93084 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A3Q93084 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.92■□□□□ 0.46
ATP2A3Q93084 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ATP2A3Q93084 AL353135.1-201ENST00000606729 504 ntBASIC17.92■□□□□ 0.46
ATP2A3Q93084 GGTLC5P-201ENST00000617623 998 ntBASIC17.92■□□□□ 0.46
ATP2A3Q93084 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.92■□□□□ 0.46
ATP2A3Q93084 PCDHA12-202ENST00000613593 2588 ntBASIC17.92■□□□□ 0.46
ATP2A3Q93084 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A3Q93084 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.92■□□□□ 0.46
ATP2A3Q93084 AD000864.1-201ENST00000624076 2295 ntBASIC17.92■□□□□ 0.46
ATP2A3Q93084 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.92■□□□□ 0.46
ATP2A3Q93084 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A3Q93084 REXO1L11P-201ENST00000620964 1927 ntBASIC17.92■□□□□ 0.46
ATP2A3Q93084 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A3Q93084 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A3Q93084 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.91■□□□□ 0.46
ATP2A3Q93084 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A3Q93084 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.91■□□□□ 0.46
ATP2A3Q93084 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ATP2A3Q93084 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A3Q93084 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP2A3Q93084 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A3Q93084 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A3Q93084 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A3Q93084 AC211486.1-202ENST00000416371 468 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms